PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH96039.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | ERF | ||||||||
Protein Properties | Length: 201aa MW: 22566.1 Da PI: 10.173 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.8 | 3.7e-20 | 20 | 68 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr ++ +gr++AeIrdp gk++r++lg+f+taeeAa+a++ a+++++g MCH96039.1 20 FRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAARAYDTAAREFRG 68 8*******.**********8...557************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
ITGPNPTAQA QTQAQKEIRF RGVRKRPWGR YAAEIRDPGK KTRVWLGTFD TAEEAARAYD 60 TAAREFRGSK AKTNFPTPME IINNRSPSQS STLESPSPPP XXXXXXXXXX XXXXXXXXXX 120 XXXXXXXXXX XXXXXXXAET KLSVVGRREM CGFDLPVTDF RRAAVQSSDS GSSSSVVDYE 180 RVPRQRHLDL DLNVPPPPEV A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15210.1 | 4e-26 | ERF family protein |