PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH95537.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 279aa    MW: 31676.6 Da    PI: 7.824
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH95537.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS289.78.1e-89127496374
        GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak.rledlelee 193
                 ++aN+aI +  +g++ +HiiD+++++ lQWp+L++ LasRpegpp+lRiTg++  +++++ +l++  + L + A +lg+ +ef+++++  + + l++e+
  MCH95537.1   1 MAANEAICQGSKGKSSIHIIDLGMEHTLQWPSLIRNLASRPEGPPRLRITGFST-NEENNVKLHTSMNFLVEEAISLGIVLEFRIILEPaTPSFLTIEN 98 
                 58****************************************************.557999999*********************8655488999**** PP

        GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                 L++++gE+l Vn++l+lh+ ++es    +   ++L+ +k+lsP  v+vveq+++hn++ Fl rfle+l+yysa+fdslea +pr+s  r+k+Er+ +++
  MCH95537.1  99 LNLREGESLFVNSILKLHNYVKESRGYLK---SILQSIKKLSPIAVTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEACMPRNSPIRMKIERAHFAE 194
                 *********************88877766...9****************************************************************** PP

        GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ei+n+va eg +r erhe++ +Wr++l++aGF+ +pl+   ++qa+++l+ ++ +gy++ +e+g+l+lgWk+rp++++SaW+
  MCH95537.1 195 EICNIVAYEGPDRMERHERVDQWRRQLGRAGFHVMPLK--CTSQARMMLSVYDCEGYTLSCEKGCLLLGWKGRPIMMASAWQ 274
                 *************************************7..679**************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MAANEAICQG SKGKSSIHII DLGMEHTLQW PSLIRNLASR PEGPPRLRIT GFSTNEENNV  60
KLHTSMNFLV EEAISLGIVL EFRIILEPAT PSFLTIENLN LREGESLFVN SILKLHNYVK  120
ESRGYLKSIL QSIKKLSPIA VTVVEQDTNH NGPFFLGRFL ESLHYYSAIF DSLEACMPRN  180
SPIRMKIERA HFAEEICNIV AYEGPDRMER HERVDQWRRQ LGRAGFHVMP LKCTSQARMM  240
LSVYDCEGYT LSCEKGCLLL GWKGRPIMMA SAWQVASFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.15e-64GRAS family protein