PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH95455.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 139aa MW: 16831.1 Da PI: 7.3478 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.7 | 3.1e-21 | 35 | 88 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe+++++ e++++LAkklgL+ rqV vWFqNrRa++k MCH95455.1 35 KKRRLTSEQVHLLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 88 56789************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 137 | 6.4e-44 | 34 | 124 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl++eqv+lLE+sFeee+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd+l + +++ ke+e+L++e+ MCH95455.1 34 EKKRRLTSEQVHLLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKSSYDSLLSTYDSIMKENEKLKSEV 124 69**************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
RSMMGMEEGS KRRPFFSSPD ELYDEEYYEE QSPEKKRRLT SEQVHLLEKS FEEENKLEPE 60 RKTQLAKKLG LQPRQVAVWF QNRRARWKTK QLERDYDVLK SSYDSLLSTY DSIMKENEKL 120 KSEVLIYMCS IKRIESLYD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 83 | 91 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 3e-57 | HD-ZIP family protein |