PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH94818.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 93aa    MW: 10834.6 Da    PI: 10.9556
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH94818.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.3e-112973554
                HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  MCH94818.1 29 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 73
                99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MPTTVPTAPH PPAMRPRVRA RRGQATDPHS IAERLRRERI AERIRALQEL VPSVNKTDRA  60
AMLDEIVDYV KFLRLQVKVN SFEIFMDFTF DFV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13439RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.22e-17bHLH family protein