PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH93897.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | WRKY | ||||||||
Protein Properties | Length: 260aa MW: 28675.5 Da PI: 10.8636 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 31.8 | 2.8e-10 | 240 | 260 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 D+++WrKYGqK++kgs++pr MCH93897.1 240 ADEFSWRKYGQKPIKGSPYPR 260 69******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
PVMIPKMRMQ EQMAIEEAAS AGMKSMEHFI RVLSSSSSSS SSSDQRSRLD LVNKLDCTEI 60 TDFTVSKFKQ VINLLNRTGH ARFRRAPSNF SSSTSSSQFQ SQIQSEKFNP QPQSTTLVFA 120 KPTQTVKPIP NLKPKQNQST DLSVSQYSKS KEAYSVSTTT SSFLSTITGD GSVSDGKIGP 180 IISSGKPPLA SSXXXXXXXX XXXXXXXXSG PCHCSKRRKS RVKRTIRVPA ISSKVADIPA 240 DEFSWRKYGQ KPIKGSPYPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 2e-59 | WRKY family protein |