PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH92394.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | FAR1 | ||||||||
Protein Properties | Length: 132aa MW: 15062.1 Da PI: 6.3552 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 54.6 | 3.7e-17 | 57 | 130 | 1 | 73 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekd 73 ++Y +YAk+ GFs r+ + +ks+++g ++ ++ Cskeg+r++++ k ++ + + etr+gCka+l +kk++d MCH92394.1 57 NYYVSYAKKKGFSFRMGRVTKSRTDGVVIGQQILCSKEGFRSNKNLKkENGSLIVHDETRVGCKAMLYIKKKED 130 69***************************************9998772334445899*************9964 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence |
MTDHEMVDMH EHTTMISSDE IHESAIDADP LNDRISSELA LEPFEGMEFA SIEDVKNYYV 60 SYAKKKGFSF RMGRVTKSRT DGVVIGQQIL CSKEGFRSNK NLKKENGSLI VHDETRVGCK 120 AMLYIKKKED RP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 1e-18 | FAR1 family protein |