PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH90242.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 114aa    MW: 12800.9 Da    PI: 6.7593
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH90242.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.3e-054769323
                ET..TTTEEESSHHHHHHHHHHT CS
     zf-C2H2  3 Cp..dCgksFsrksnLkrHirtH 23
                C+   Cgk+F +   L++H   H
  MCH90242.1 47 CSyeGCGKTFIDAGALRKHSHIH 69
                77779**************8776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
DVVATGGKCM LLRWVTEDTI KALKEKEKEP LAPEPEPEPT TEVLFLCSYE GCGKTFIDAG  60
ALRKHSHIHG ERQFVCHYEG CGKVMNLFFR FTHSQVHICM LNCMVVSCNI LGSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06634.16e-30C2H2 family protein