PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH87167.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | CPP | ||||||||
Protein Properties | Length: 157aa MW: 16921 Da PI: 7.4375 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 45.9 | 1.1e-14 | 14 | 51 | 2 | 39 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 +k+ CnC+ks C++kYC Cf++g+ Cs CkC++CkN MCH87167.1 14 QKRVCNCNKSGCQRKYCACFKDGVGCSPICKCQGCKNI 51 5789*********************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
EDPNITLASK PQLQKRVCNC NKSGCQRKYC ACFKDGVGCS PICKCQGCKN IHGRKNSTAE 60 TKSELEETKT LQISRTLPPL PYSSMGKPPQ ISCSDLFGSQ NQELVESNAT GSITIPDDVN 120 CINTSSIGKW ICISNPECEN GVESSPTRSG GQNSTLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22780.1 | 3e-13 | CPP family protein |