PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH84260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | ZF-HD | ||||||||
Protein Properties | Length: 260aa MW: 28608.5 Da PI: 7.0796 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 89.9 | 2.4e-28 | 52 | 109 | 2 | 60 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 ++vr++eC+kNhA+s GghavDGC+Ef+++ gee+t +a+ CaAC+CHRnFHR+e + e MCH84260.1 52 STVRHRECQKNHAVSFGGHAVDGCCEFIAA-GEENTLEAVICAACNCHRNFHRKEIDGE 109 5799*************************9.9999*******************98865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MEFDEHEEQE EEMEISETQT PVPATYDSRS KNVAGVDGRK GNGNGNSSRF SSTVRHRECQ 60 KNHAVSFGGH AVDGCCEFIA AGEENTLEAV ICAACNCHRN FHRKEIDGET VSSCQRPQPP 120 PPPQPYHHQF SPYYHRVPPS TAGYLHHHLA TPVAHHRPLV LPAAASGGGL SREEDDMSNP 180 SSSGGGGGGN GGGGGSRKRF RTKFTQEQRD KLLAFAEEHG WRIQKQDEAA IEQFCAENCV 240 KRNVLKVWMH NNKNTLGKKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 7e-57 | ZF-HD family protein |