PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH83744.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family LBD
Protein Properties Length: 208aa    MW: 23300.4 Da    PI: 8.7031
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH83744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26049.41.3e-1590180394
      DUF260   3 aaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                 ++C+ + r+C+++C+ +  f ++q  +++ vh  F  +n+ + ++a++ ++  e+ +++l +e+ ar++dPv G++g++l+ q ++++l +  
  MCH83744.1  90 SGCQEQHRRCVNQCPTRNFFLNRQ--EYRHVHNTFTSKNIRRWMAAARLNNnGERCAAALKWEGMARTNDPVAGSHGLYLQAQAEIANLTEVN 180
                 58*****************98876..999*****************9777647999******************************9987644 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
IRAISVTPPE LLFCNLVGER RSGKFTSSAI VYLSLINFLC HLNSLAGTLS RRNSVIAGTP  60
NFRLEPFPEH CNSVTTFPNS LSATSVPSHS GCQEQHRRCV NQCPTRNFFL NRQEYRHVHN  120
TFTSKNIRRW MAAARLNNNG ERCAAALKWE GMARTNDPVA GSHGLYLQAQ AEIANLTEVN  180
RNLQDDIALY QGMIEILMPP PPPQDPQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.13e-08LBD family protein