PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH83477.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family LBD
Protein Properties Length: 136aa    MW: 15549.8 Da    PI: 5.7596
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH83477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26070.14.6e-2271042100
      DUF260   2 CaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                 CaaCk+ ++ C+++C++ p +p+  ++++  ++++F+++++   lk++ +e++++++++l++e+ +r +dP++G++gv++k+ ++  qlk+e +l k +
  MCH83477.1   7 CAACKISKKPCTDSCPIKPFYPDP-HEDYDDINEVFSVEHLKDWLKKTTDEQKQNLIEALAWESGIRKQDPISGSFGVYKKICEENLQLKVEQKLSKMK 104
                 *******************98866.599**************************************************************999988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MDGKKTCAAC KISKKPCTDS CPIKPFYPDP HEDYDDINEV FSVEHLKDWL KKTTDEQKQN  60
LIEALAWESG IRKQDPISGS FGVYKKICEE NLQLKVEQKL SKMKIETLEG KIAAISEEHF  120
NLWVEAEELK KKASSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.18e-18LBD family protein