PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH82883.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 427aa    MW: 48138.8 Da    PI: 6.0387
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH82883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.51.2e-3281138260
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ d++++ei+Y+g+Hnhek
  MCH82883.1  81 EDGYNWRKYGQKQVKGSEYPRSYYKCTQTNCQVKKKVERSH-DGQITEIIYRGNHNHEK 138
                 7****************************************.***************85 PP
2WRKY101.26.3e-32293351159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gC+v+k+ver++++ k++++tYeg+Hnh+
  MCH82883.1 293 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTVGCTVRKHVERASHNLKYIITTYEGKHNHD 351
                 59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    
MLDFSFSEDF SNDYFHNDVK MVDDVIIDAN NVDMPISCSE ETSDESTLPE NSINDDDVGQ  60
QFVLEDEHKD MTHATGAKTS EDGYNWRKYG QKQVKGSEYP RSYYKCTQTN CQVKKKVERS  120
HDGQITEIIY RGNHNHEKPH SSRRGSTPSN DEMLDIVEAN DTCDRADVDS VGRNIKSRGK  180
DAKHNLEGKL DCQERKSLSS IATDISDRIK RFRSLGMSES DDAPEHSSAH TNHDGDKDGA  240
TQEVLPLRGD AEEDESESKR RKNESYPVET MVPSRAIREP RVVVQVESEV DILDDGYRWR  300
KYGQKVVKGN PNPRSYYKCT TVGCTVRKHV ERASHNLKYI ITTYEGKHNH DVATARNNIH  360
ISSNDVALPS SGANVHASGI PKSETPQTLA THFDRKLDFS NGFLRSSLMG SFSNDMKFGP  420
SSISQMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.17e-86WRKY family protein