PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG074300.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 494aa MW: 53731.3 Da PI: 6.8486

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG074300.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.6e-16	65	109	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G W+ I +++g ++t+ q++s+ qk+ TRIDC7BG074300.3 65 REKWTEEEHDKFLEALKLYGRS-WRQIQEHIG-TKTAVQIRSHAQKF 109 789***************55.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MPGRHSTKSR NNGWCFPSQE RDALDSSRLP ISQGLSVDVA MQPNEEGTGE HPVKPRKPYT 60 ITKQREKWTE EEHDKFLEAL KLYGRSWRQI QEHIGTKTAV QIRSHAQKFF SKVVREPGAK 120 IEIEIPPPRP KRKPLHPYPR KRANSCNGAN PANGQSKLAP ISSSSGSDQE NGSPMSVLSV 180 MQSDAFGSSM SNPSSRSTSP ESSDEENNVL PMVNGGEGQQ TGIDQSHKEA DQENKDTGTS 240 EEDSSDEVQV TSVKLFGKTV VIPDPRKRCS LDTGSGHENG EQTSQSSNKG TSQAPLAVDI 300 PTHTKGEQIS QSSNKATSPA PLAVEVPTYT NGEQISEFSN KATSQAPLAV EIQAYAAPTS 360 GWVLPYNSFP VHFGESAEAR IARLHMWWPY YGFPMVHPSG PSAVAHNGKA TDESEAVKSP 420 PVESSSDFDD NTQATASKQW KVPESLGTAQ APPSVSNFQL KPSTNSAFVR VKPIISSGDE 480 PARGFVPYKR CRVE

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MPGRHSTKSR NNGWCFPSQE RDALDSSRLP ISQGLSVDVA MQPNEEGTGE HPVKPRKPYT  60
ITKQREKWTE EEHDKFLEAL KLYGRSWRQI QEHIGTKTAV QIRSHAQKFF SKVVREPGAK  120
IEIEIPPPRP KRKPLHPYPR KRANSCNGAN PANGQSKLAP ISSSSGSDQE NGSPMSVLSV  180
MQSDAFGSSM SNPSSRSTSP ESSDEENNVL PMVNGGEGQQ TGIDQSHKEA DQENKDTGTS  240
EEDSSDEVQV TSVKLFGKTV VIPDPRKRCS LDTGSGHENG EQTSQSSNKG TSQAPLAVDI  300
PTHTKGEQIS QSSNKATSPA PLAVEVPTYT NGEQISEFSN KATSQAPLAV EIQAYAAPTS  360
GWVLPYNSFP VHFGESAEAR IARLHMWWPY YGFPMVHPSG PSAVAHNGKA TDESEAVKSP  420
PVESSSDFDD NTQATASKQW KVPESLGTAQ APPSVSNFQL KPSTNSAFVR VKPIISSGDE  480
PARGFVPYKR CRVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	1e-34	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG074300.3