PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG070040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 254aa MW: 27834.9 Da PI: 7.2992 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.7 | 4.8e-17 | 10 | 55 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd l ++v+ +G ++W++I r ++ gR++k+c++rw + TRIDC7BG070040.1 10 RGPWSPEEDAALRRLVECHGARNWTAIGRGVP-GRSGKSCRLRWCNQ 55 89******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 49.9 | 7.1e-16 | 62 | 104 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r ++T+eEd +++a+++lG++ W+ Iar + gRt++ +k++w+ TRIDC7BG070040.1 62 RRPFTAEEDAAIARAHARLGNR-WAVIARLLH-GRTDNAVKNHWN 104 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
IAMEGCDRIR GPWSPEEDAA LRRLVECHGA RNWTAIGRGV PGRSGKSCRL RWCNQLSPGV 60 ERRPFTAEED AAIARAHARL GNRWAVIARL LHGRTDNAVK NHWNCSLKRR LADVGVAEEE 120 ERPCKRASVT PESTSGSGSG CGSGSDRSDL SHGGVFGGQV YRPVARAGGF EPADCAMSRR 180 HEEEREEQED PLTSLSLSLP GTDVQGFHHD SSHSHFHQPS PSPSPPPTPA PTSYPFSPEF 240 AALMQEMIRD EVRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 1e-48 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG070040.1 |