PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG070020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 297aa MW: 31871.3 Da PI: 8.3143 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.4 | 6.1e-17 | 10 | 55 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd l ++v+ +G ++W++I r ++ gR++k+c++rw + TRIDC7BG070020.1 10 RGPWSPEEDAALRRLVECHGARNWTAIGRGVP-GRSGKSCRLRWCNQ 55 89******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 53.2 | 6.7e-17 | 62 | 104 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r ++T++Ed ++++a+++lG++ W++Iar++ gRt++ +k++w+ TRIDC7BG070020.1 62 RRPFTADEDTIIARAHARLGNR-WAAIARHLR-GRTDNAVKNHWN 104 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
PAMEGCDRIR GPWSPEEDAA LRRLVECHGA RNWTAIGRGV PGRSGKSCRL RWCNQLSPGV 60 ERRPFTADED TIIARAHARL GNRWAAIARH LRGRTDNAVK NHWNCSLKRR LGAVDVAGEG 120 EEERPSKRAS VTPESTSGSG SGSGSGSNRS DLSHGGAFGL GQVYRPVARA GGFEPADCAM 180 SQRHEEEEQE DPFTSLSLSL PGTDAHAFHH DSSRSHFHQP SPSPSPPPAP ASTTAPPASS 240 YPFSPAFAAA MQEMIRDEVR RYISGVSCGA NLPSMSQLLD GVMRAAVERA GGVSRMQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 6e-57 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG070020.1 |