PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG065830.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 371aa MW: 42144.2 Da PI: 5.6096

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG065830.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.5	2.2e-13	24	103	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF + ks+ + +++ t+++ vC ++gk+e e+++ + r++C +++ + +d+ w++t+ +++HnH+l+ TRIDC7BG065830.3 24 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 103 6***************9998.45558999*****9987655.........8999999999999999*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
EQPDKSVMRP ALGLSFDSLG EAYDFYNLYS WEIGFGIGYG KSRLNAQRTK TMQEIVCGCS 60 GKTEAENSRS CRCECPVLIR LLRASDNSWY ITEHRENHNH SLSLTMGEKV HCPSHKHIDV 120 YTKDLIRQLR ENNVNLGKVY NIIGSFFGSV EKVPFTKRTL RNIRGKINRE QADDDVQKTL 180 ESDLKNCDVF FICWVSGLLK FDLTSVVLLL LHVSQPWFFD WMDYGTYNVE QHTVPRISLY 240 TAEICTRLIY VTREYPDIFP TKPHDEFDHL DEDWHDVVGE PGGILQHEGQ REALRAAEAL 300 IAAIQQDCTT PEGRRGKQGA GGDTDTNTLN DKGKGVADES SDSSSSDSDD ERVDPSIRLA 360 RPILRADRRG F

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

EQPDKSVMRP ALGLSFDSLG EAYDFYNLYS WEIGFGIGYG KSRLNAQRTK TMQEIVCGCS  60
GKTEAENSRS CRCECPVLIR LLRASDNSWY ITEHRENHNH SLSLTMGEKV HCPSHKHIDV  120
YTKDLIRQLR ENNVNLGKVY NIIGSFFGSV EKVPFTKRTL RNIRGKINRE QADDDVQKTL  180
ESDLKNCDVF FICWVSGLLK FDLTSVVLLL LHVSQPWFFD WMDYGTYNVE QHTVPRISLY  240
TAEICTRLIY VTREYPDIFP TKPHDEFDHL DEDWHDVVGE PGGILQHEGQ REALRAAEAL  300
IAAIQQDCTT PEGRRGKQGA GGDTDTNTLN DKGKGVADES SDSSSSDSDD ERVDPSIRLA  360
RPILRADRRG F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	5e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG065830.3