PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG065830.29

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 408aa MW: 46489.4 Da PI: 6.5078

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG065830.29	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.3	2.5e-13	61	140	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF + ks+ + +++ t+++ vC ++gk+e e+++ + r++C +++ + +d+ w++t+ +++HnH+l+ TRIDC7BG065830.29 61 DFYNLYSWEIGFGIGYGKSRLN-AQRTKTMQEIVCGCSGKTEAENSR---------SCRCECPVLIRLLRASDNSWYITEHRENHNHSLS 140 6***************9998.45558999*****9987655.........8999999999999999*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MQLSFKTFAG CVLEVRRQTA RHVHRMTALE LTIRKYAEQP DKSVMRPALG LSFDSLGEAY 60 DFYNLYSWEI GFGIGYGKSR LNAQRTKTMQ EIVCGCSGKT EAENSRSCRC ECPVLIRLLR 120 ASDNSWYITE HRENHNHSLS LTMGEKVHCP SHKHIDVYTK DLIRQLRENN VNLGKVYNII 180 GSFFGSVEKV PFTKRTLRNI RGKINREQAD DDVQKTLESD LKNCDVFFIC WVSGLLKFDL 240 TSVVLLLLHV SQPWFFDWMD YGTYNVEQHT VPRISLYTAE ICTRLIYVTR EYPDIFPTKP 300 HDEFDHLDED WHDVVGEPGG ILQHEGQREA LRAAEALIAA IQQDCTTPEG RRGKQGAGGD 360 TDTNTLNDKG KGVADESSDS SSSDSDDERV DPSIRLARPI LRADRRGF

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MQLSFKTFAG CVLEVRRQTA RHVHRMTALE LTIRKYAEQP DKSVMRPALG LSFDSLGEAY  60
DFYNLYSWEI GFGIGYGKSR LNAQRTKTMQ EIVCGCSGKT EAENSRSCRC ECPVLIRLLR  120
ASDNSWYITE HRENHNHSLS LTMGEKVHCP SHKHIDVYTK DLIRQLRENN VNLGKVYNII  180
GSFFGSVEKV PFTKRTLRNI RGKINREQAD DDVQKTLESD LKNCDVFFIC WVSGLLKFDL  240
TSVVLLLLHV SQPWFFDWMD YGTYNVEQHT VPRISLYTAE ICTRLIYVTR EYPDIFPTKP  300
HDEFDHLDED WHDVVGEPGG ILQHEGQREA LRAAEALIAA IQQDCTTPEG RRGKQGAGGD  360
TDTNTLNDKG KGVADESSDS SSSDSDDERV DPSIRLARPI LRADRRGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	6e-10	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG065830.29