PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG063690.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 467aa    MW: 50423.4 Da    PI: 6.4638
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG063690.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.64e-15126185155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV++++++gr++A+++d  +   g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  TRIDC7BG063690.2 126 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDMAALKYWG 185
                       57*******************666664477446*************************98 PP
2AP247.44.7e-15228279155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  TRIDC7BG063690.2 228 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 279
                       57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    
MDMDMSSATH PAHHWLSFSL SNNYHHGLLE ALSSSSSGHQ IAGEEAPVDE APKMEDFLGG  60
VGTASTAVVD HGELGSIAAG FLHRYPAHDG TLDQNSGAVT VAAATMEVAE SDQARRPAET  120
FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR REGQSRKGRQ VYLGGYDKEE KAARAYDMAA  180
LKYWGPTTTT NFPVANYEKE LEEMKSMTRQ EFIASLRRKS SGFSRGASIY RGVTRHHQHG  240
RWQARIGRVA GNKDLYLGTF STQEEAAEAY DIAAIKFRGL NAVTNFDMSR YDVESILNSD  300
LPIGAGAAAR ASKFQPDVLS LPAPNVASPD MLPPAEKDYW SLLAMHYQQQ QQQHLQQQQF  360
PGSAFDAYGS GVNVDFTMGM SGTNNPSGGG ATVWGATGAT GHGGDGSRQS NSYASNIPYT  420
SMLSGSAASA GGGYEGSTGN NGTWVTTSNP AAGTTAPQYY NYLFGME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.11e-124AP2 family protein