PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG063560.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 293aa MW: 30931 Da PI: 10.4905

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG063560.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.1	7.8e-41	147	223	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cq+egC+adls ak+yhrrhkvCe h+ka+ v+++g++qrfCqqCsrfh l+efDe+krsCr+rLa+hn+rrrk++ TRIDC7BG063560.3 147 RCQAEGCKADLSGAKHYHRRHKVCEYHAKASLVAAAGKQQRFCQQCSRFHVLTEFDESKRSCRKRLAEHNRRRRKPA 223 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MVQAGGGGGG GQRHQGAMMY DNFDFAAAAA AFGQFQDAPH HQMLALPPNG GGAGGLLPMA 60 PPPMPGMQLQ MPPMGMHGHG DVYPALGMVK REGGAGAGDA GRIGLNLGRR TYFSPGDMMA 120 VDRLLMRSRL GGVFGLGFGG AHHQPPRCQA EGCKADLSGA KHYHRRHKVC EYHAKASLVA 180 AAGKQQRFCQ QCSRFHVLTE FDESKRSCRK RLAEHNRRRR KPASSSTTAT SKDSAPPSKK 240 PNPGAISSSY AADNNNRADL SATKSNISSN TSAISCLQQH DQSKAAAAAA RPM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	222	KRSCRKRLAEHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	1e-46	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG063560.3