PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG060130.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 283aa    MW: 30878 Da    PI: 6.4261
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG060130.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.11.8e-1427122297
                       EEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 
                       fk+lt+sd  +sg lv+pk  a ++         +++++l++ d +  +W++++++++++++++l++GW  Fv+a++ k+g  + +   +r +
  TRIDC7BG060130.1  27 FKKLTHSDIRESG-LVVPKATA-SIfpdlaV--DQQEQDLVMFDIKAGTWNFTHSHKGGRQMHFLRRGWPTFVEAKRPKSGNPLFLL--RRvE 113
                       6999999999998.*******9.555*9742..346679****************************************99988777..3446 PP

                       EE..EEEEE CS
                B3  89 efelvvkvf 97 
                       ++ +++ ++
  TRIDC7BG060130.1 114 DGAFFIELR 122
                       666676665 PP
2Auxin_resp31.19.8e-12156231582
        Auxin_resp   5 astksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkma...fe.tedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                        + +  F+v+Y+P + t  Fvv+++++ +a+ vk+ +Gm+++ +   +    d+  +  +G++++v++      p S WrsL
  TRIDC7BG060130.1 156 PAGQGQFQVTYYPHKETGLFVVPRWELDRAVGVKWEAGMQVRARklqLHpIADQIPQPATGVITAVHQ------PISGWRSL 231
                       455678***********************************875211321356666666999999999......67899988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
SIILSPAPDE PQGGAPAPAG DLFLYAFKKL THSDIRESGL VVPKATASIF PDLAVDQQEQ  60
DLVMFDIKAG TWNFTHSHKG GRQMHFLRRG WPTFVEAKRP KSGNPLFLLR RVEDGAFFIE  120
LRSSLDTPEA EEDRLLAPPL VLQEEINEAA TAAAAPAGQG QFQVTYYPHK ETGLFVVPRW  180
ELDRAVGVKW EAGMQVRARK LQLHPIADQI PQPATGVITA VHQPISGWRS LEVVWGQSST  240
SSPTNAWDVE VVPGDNAPPL KKQKVAATPA PQSGDPSTAS HVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.16e-14ARF family protein