PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG050660.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 1070aa    MW: 119581 Da    PI: 6.6504
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG050660.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.26.4e-2371172199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae++       + +++  ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F   +
  TRIDC7BG050660.8  71 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV--R 159
                       99*****************************954.4444.48************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++++l+++++r+
  TRIDC7BG050660.8 160 DERQQLLLGIRRA 172
                       577788***9997 PP
2Auxin_resp117.98.5e-39197280183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+  +rr++Gt++g++dldpvrW+nS+Wr+L+
  TRIDC7BG050660.8 197 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 280
                       79**********************************9*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1070 aa     Download sequence    
MQKDVDAHVP NYPNLPSKLI CLLHNITLHA DLETDEVYAQ MTLQPVTSYG KEALQLSELA  60
LKQARPQNEF FCKTLTASDT STHGGFSVPR RAAEKIFPPL DFSMQPPAQE IQARDLHDNV  120
WTFRHIYRGQ PKRHLLTTGW SLFVSGKRLF AGDSVIFVRD ERQQLLLGIR RANRQPTNIS  180
SSVLSSDSMH IGILAAAAHA AANNSPFTIF YNPRASPTEF VIPFAKYQKA VYGNQLSLGM  240
RFRMMFETEE LGTRRYMGTI TGINDLDPVR WKNSQWRNLQ VGWDESAAGE RRNRVSIWEI  300
EPVAAPFFIC PPPFFGAKRP RQLDDESSEM ENLLKRAMPW LGEEICIKDP QTQNTIMPGL  360
SLVQWMNMNM QQSSSFANTA MQSEYLRSIT NPSMQNIGSG DLSRQLCLQN QLLQQNNMQF  420
NTPKLPHQMQ PNNELSKAAL PLNQNGASIK PEEQTQDASN FQRQQQSMNY ALPLSQAQTS  480
LAQAQVLIQS QMQQQQQQQQ QPHIPQNQLP TAKQQKFLQQ QQLLLQQQQL QQHQHQLQQQ  540
QQQQLSKMPA QLPNMSNQQL QLSDQQLQLQ LLQKLQQQQQ SLLSQPGVTL AQLPLIQEQQ  600
KLLMDMQQQL SSSHSLSQQQ MMPQQSTKIP SHAASLPPPM QPDTTHQKLP QKQALPADTL  660
EAAIPTTTSL KFSSANGSPL RMPGATHSVV TEEIPSCSTS PSTANGNHLL QPVPGRDQYP  720
SMINTEKAPH STAPMSVPSS LDAVTGAQRM TKELPKLNSN VKQNMMPSKL PNGGAGPQNF  780
ANNAPPTDYL ETASSATSVW LSQADGLLHP NFPMSNFSQQ QLFKDAPPDT EIPAEIPSNN  840
ALFGISNDGH VGFPMVTDDF LTNGIDAVKY ENHISTDIDN NYRIPKDAQQ EISSSMVSQS  900
FGASDMAFNS IDSGINNGAF LNKSSWPPAP PVKRMRTFTK VYKRGAVGRS IDISQYAGYE  960
ELKHALARMF SIEGQLEERQ RIGWKLVYRD HEDDILLLGD DPWEEFVNCV KCIRILSPQE  1020
VQQMSLDGDL GSSVVPNQAC SSSEGGGNAW RARCDQNSGN PSTGSYDQFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.11e-176ARF family protein