PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG050660.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARF | ||||||||
Protein Properties | Length: 600aa MW: 68090.7 Da PI: 8.4061 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 73.4 | 2.8e-23 | 71 | 172 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F + TRIDC7BG050660.5 71 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV--R 159 99*****************************954.4444.48************************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++++l+++++r+ TRIDC7BG050660.5 160 DERQQLLLGIRRA 172 577888***9997 PP | |||||||
2 | Auxin_resp | 119 | 3.9e-39 | 197 | 280 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+ +rr++Gt++g++dldpvrW+nS+Wr+L+ TRIDC7BG050660.5 197 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 280 79**********************************9*********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 600 aa Download sequence |
MQKDVDAHVP NYPNLPSKLI CLLHNITLHA DLETDEVYAQ MTLQPVTSYG KEALQLSELA 60 LKQARPQNEF FCKTLTASDT STHGGFSVPR RAAEKIFPPL DFSMQPPAQE IQARDLHDNV 120 WTFRHIYRGQ PKRHLLTTGW SLFVSGKRLF AGDSVIFVRD ERQQLLLGIR RANRQPTNIS 180 SSVLSSDSMH IGILAAAAHA AANNSPFTIF YNPRASPTEF VIPFAKYQKA VYGNQLSLGM 240 RFRMMFETEE LGTRRYMGTI TGINDLDPVR WKNSQWRNLQ VGWDESAAGE RRNRVSIWEI 300 EPVAAPFFIC PPPFFGAKRP RQLDDESSEM ENLLKRAMPW LGEEICIKDP QTQNTIMPGL 360 SLVQWMNMNM QQSSSFANTA MQSEYLRSIT NPSMQNIGSG DLSRQLCLQN QLLQQNNMQF 420 NTPKLPHQMQ PNNELSKAAL PLNQNGASIK PEEQTQDASN FQRQQQSMNY ALPLSQAQTS 480 LAQAQVLIQS QMQQQQQQQQ QPHIPQNQLP TANNINSSSN KNFYSSSSFY FSNNNCNNIN 540 ISYNNSNSSN SVRCLHSYQI CQISSCNYRI SSFSFNSCKS YSNSSNHCCP NLELPLRNYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19220.1 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG050660.5 |