PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG050660.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 1080aa MW: 120872 Da PI: 6.6114

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG050660.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.2	6.5e-23	71	172	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F + TRIDC7BG050660.4 71 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV--R 159 99***************************954.4444.48********************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++++l+++++r+ TRIDC7BG050660.4 160 DERQQLLLGIRRA 172 577788*9997 PP
2	Auxin_resp	117.9	8.6e-39	197	280	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+ +rr++Gt++g++dldpvrW+nS+Wr+L+ TRIDC7BG050660.4 197 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 280 79********************************9*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1080 aa Download sequence
MQKDVDAHVP NYPNLPSKLI CLLHNITLHA DLETDEVYAQ MTLQPVTSYG KEALQLSELA 60 LKQARPQNEF FCKTLTASDT STHGGFSVPR RAAEKIFPPL DFSMQPPAQE IQARDLHDNV 120 WTFRHIYRGQ PKRHLLTTGW SLFVSGKRLF AGDSVIFVRD ERQQLLLGIR RANRQPTNIS 180 SSVLSSDSMH IGILAAAAHA AANNSPFTIF YNPRASPTEF VIPFAKYQKA VYGNQLSLGM 240 RFRMMFETEE LGTRRYMGTI TGINDLDPVR WKNSQWRNLQ VGWDESAAGE RRNRVSIWEI 300 EPVAAPFFIC PPPFFGAKRP RQLDDESSEM ENLLKRAMPW LGEEICIKDP QTQNTIMPGL 360 SLVQWMNMNM QQSSSFANTA MQSEYLRSIT NPSMQNIGSG DLSRQLCLQN QLLQQNNMQF 420 NTPKLPHQMQ PNNELSKAAL PLNQNGASIK PEEQTQDASN FQRQQQSMNY ALPLSQAQTS 480 LAQAQVLIQS QMQQQQQQQQ QPHIPQNQLP TAKQQEQQHQ QQQQQKFLQQ QQLLLQQQQL 540 QQHQHQLQQQ QQQQLSKMPA QLPNMSNQQL QLSDQQLQLQ LLQKLQQQQQ SLLSQPGVTL 600 AQLPLIQEQQ KLLMDMQQQL SSSHSLSQQQ MMPQQSTKIP SHAASLPPPM QPDTTHQKLP 660 QKQALPADTL EAAIPTTTSL KFSSANGSPL RMPGATHSVV TEEIPSCSTS PSTANGNHLL 720 QPVPGRDQYP SMINTEKAPH STAPMSVPSS LDAVTGAQRM TKELPKLNSN VKQNMMPSKL 780 PNGGAGPQNF ANNAPPTDYL ETASSATSVW LSQADGLLHP NFPMSNFSQQ QLFKDAPPDT 840 EIPAEIPSNN ALFGISNDGH VGFPMVTDDF LTNGIDAVKY ENHISTDIDN NYRIPKDAQQ 900 EISSSMVSQS FGASDMAFNS IDSGINNGAF LNKSSWPPAP PVKRMRTFTK VYKRGAVGRS 960 IDISQYAGYE ELKHALARMF SIEGQLEERQ RIGWKLVYRD HEDDILLLGD DPWEEFVNCV 1020 KCIRILSPQE VQQMSLDGDL GSSVVPNQAC SSSEGGGNAW RARCDQNSGN PSTGSYDQFE

Sequence ? help Back to Top

Protein Sequence Length: 1080 aa Download sequence

MQKDVDAHVP NYPNLPSKLI CLLHNITLHA DLETDEVYAQ MTLQPVTSYG KEALQLSELA  60
LKQARPQNEF FCKTLTASDT STHGGFSVPR RAAEKIFPPL DFSMQPPAQE IQARDLHDNV  120
WTFRHIYRGQ PKRHLLTTGW SLFVSGKRLF AGDSVIFVRD ERQQLLLGIR RANRQPTNIS  180
SSVLSSDSMH IGILAAAAHA AANNSPFTIF YNPRASPTEF VIPFAKYQKA VYGNQLSLGM  240
RFRMMFETEE LGTRRYMGTI TGINDLDPVR WKNSQWRNLQ VGWDESAAGE RRNRVSIWEI  300
EPVAAPFFIC PPPFFGAKRP RQLDDESSEM ENLLKRAMPW LGEEICIKDP QTQNTIMPGL  360
SLVQWMNMNM QQSSSFANTA MQSEYLRSIT NPSMQNIGSG DLSRQLCLQN QLLQQNNMQF  420
NTPKLPHQMQ PNNELSKAAL PLNQNGASIK PEEQTQDASN FQRQQQSMNY ALPLSQAQTS  480
LAQAQVLIQS QMQQQQQQQQ QPHIPQNQLP TAKQQEQQHQ QQQQQKFLQQ QQLLLQQQQL  540
QQHQHQLQQQ QQQQLSKMPA QLPNMSNQQL QLSDQQLQLQ LLQKLQQQQQ SLLSQPGVTL  600
AQLPLIQEQQ KLLMDMQQQL SSSHSLSQQQ MMPQQSTKIP SHAASLPPPM QPDTTHQKLP  660
QKQALPADTL EAAIPTTTSL KFSSANGSPL RMPGATHSVV TEEIPSCSTS PSTANGNHLL  720
QPVPGRDQYP SMINTEKAPH STAPMSVPSS LDAVTGAQRM TKELPKLNSN VKQNMMPSKL  780
PNGGAGPQNF ANNAPPTDYL ETASSATSVW LSQADGLLHP NFPMSNFSQQ QLFKDAPPDT  840
EIPAEIPSNN ALFGISNDGH VGFPMVTDDF LTNGIDAVKY ENHISTDIDN NYRIPKDAQQ  900
EISSSMVSQS FGASDMAFNS IDSGINNGAF LNKSSWPPAP PVKRMRTFTK VYKRGAVGRS  960
IDISQYAGYE ELKHALARMF SIEGQLEERQ RIGWKLVYRD HEDDILLLGD DPWEEFVNCV  1020
KCIRILSPQE VQQMSLDGDL GSSVVPNQAC SSSEGGGNAW RARCDQNSGN PSTGSYDQFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	1e-176	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG050660.4