PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG050660.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 1036aa    MW: 115779 Da    PI: 7.0285
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG050660.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.36.2e-2331132199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae++       + +++  ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F   +
  TRIDC7BG050660.3  31 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV--R 119
                       99*****************************954.4444.48************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++++l+++++r+
  TRIDC7BG050660.3 120 DERQQLLLGIRRA 132
                       577788***9997 PP
2Auxin_resp117.98.2e-39157240183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+  +rr++Gt++g++dldpvrW+nS+Wr+L+
  TRIDC7BG050660.3 157 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 240
                       79**********************************9*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1036 aa     Download sequence    
MTLQPVTSYG KEALQLSELA LKQARPQNEF FCKTLTASDT STHGGFSVPR RAAEKIFPPL  60
DFSMQPPAQE IQARDLHDNV WTFRHIYRGQ PKRHLLTTGW SLFVSGKRLF AGDSVIFVRD  120
ERQQLLLGIR RANRQPTNIS SSVLSSDSMH IGILAAAAHA AANNSPFTIF YNPRASPTEF  180
VIPFAKYQKA VYGNQLSLGM RFRMMFETEE LGTRRYMGTI TGINDLDPVR WKNSQWRNLQ  240
VGWDESAAGE RRNRVSIWEI EPVAAPFFIC PPPFFGAKRP RQLDDESSEM ENLLKRAMPW  300
LGEEICIKDP QTQNTIMPGL SLVQWMNMNM QQSSSFANTA MQSEYLRSIT NPSMQNIGSG  360
DLSRQLCLQN QLLQQNNMQF NTPKLPHQMQ PNNELSKAAL PLNQNGASIK PEEQTQDASN  420
FQRQQQSMNY ALPLSQAQTS LAQAQVLIQS QMQQQQQQQQ QPHIPQNQLP TAKQQHQQQQ  480
QQKFLQQQQL LLQQQQLQQH QHQLQQQQQQ QLSKMPAQLP NMSNQQLQLS DQQLQLQLLQ  540
KLQQQQQSLL SQPGVTLAQL PLIQEQQKLL MDMQQQLSSS HSLSQQQMMP QQSTKIPSHA  600
ASLPPPMQPD TTHQKLPQKQ ALPADTLEAA IPTTTSLKFS SANGSPLRMP GATHSVVTEE  660
IPSCSTSPST ANGNHLLQPV PGRDQYPSMI NTEKAPHSTA PMSVPSSLDA VTGAQRMTKE  720
LPKLNSNVKQ NMMPSKLPNG GAGPQNFANN APPTDYLETA SSATSVWLSQ ADGLLHPNFP  780
MSNFSQQQLF KDAPPDTEIP AEIPSNNALF GISNDGHVGF PMVTDDFLTN GIDAVKYENH  840
ISTDIDNNYR IPKDAQQEIS SSMVSQSFGA SDMAFNSIDS GINNGAFLNK SSWPPAPPVK  900
RMRTFTKVYK RGAVGRSIDI SQYAGYEELK HALARMFSIE GQLEERQRIG WKLVYRDHED  960
DILLLGDDPW EEFVNCVKCI RILSPQEVQQ MSLDGDLGSS VVPNQACSSS EGGGNAWRAR  1020
CDQNSGNPST GHQPLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.11e-151ARF family protein