PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG050660.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 1124aa MW: 125799 Da PI: 6.6451

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG050660.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.1	6.9e-23	96	197	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F + TRIDC7BG050660.2 96 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV--R 184 99***************************954.4444.48********************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++++l+++++r+ TRIDC7BG050660.2 185 DERQQLLLGIRRA 197 577788*9997 PP
2	Auxin_resp	117.8	9.1e-39	222	305	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+ +rr++Gt++g++dldpvrW+nS+Wr+L+ TRIDC7BG050660.2 222 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 305 79********************************9*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1124 aa Download sequence
LVQLPPAGSL IVYFPQGHSE QVAASMQKDV DAHVPNYPNL PSKLICLLHN ITLHADLETD 60 EVYAQMTLQP VTSYGKEALQ LSELALKQAR PQNEFFCKTL TASDTSTHGG FSVPRRAAEK 120 IFPPLDFSMQ PPAQEIQARD LHDNVWTFRH IYRGQPKRHL LTTGWSLFVS GKRLFAGDSV 180 IFVRDERQQL LLGIRRANRQ PTNISSSVLS SDSMHIGILA AAAHAAANNS PFTIFYNPRA 240 SPTEFVIPFA KYQKAVYGNQ LSLGMRFRMM FETEELGTRR YMGTITGIND LDPVRWKNSQ 300 WRNLQVGWDE SAAGERRNRV SIWEIEPVAA PFFICPPPFF GAKRPRQLDD ESSEMENLLK 360 RAMPWLGEEI CIKDPQTQNT IMPGLSLVQW MNMNMQQSSS FANTAMQSEY LRSITNPSMQ 420 NIGSGDLSRQ LCLQNQLLQQ NNMQFNTPKL PHQMQPNNEL SKAALPLNQN GASIKPEEQT 480 QDASNFQRQQ QSMNYALPLS QAQTSLAQAQ VLIQSQMQQQ QQQQQQPHIP QNQLPTASQP 540 LLSHQQQQHH HQQQQHQQQE QQHQQQQQQK FLQQQQLLLQ QQQLQQHQHQ LQQQQQQQLS 600 KMPAQLPNMS NQQLQLSDQQ LQLQLLQKLQ QQQQSLLSQP GVTLAQLPLI QEQQKLLMDM 660 QQQLSSSHSL SQQQMMPQQS TKIPSHAASL PPPMQPDTTH QKLPQKQALP ADTLEAAIPT 720 TTSLKFSSAN GSPLRMPGAT HSVVTEEIPS CSTSPSTANG NHLLQPVPGR DQYPSMINTE 780 KAPHSTAPMS VPSSLDAVTG AQRMTKELPK LNSNVKQNMM PSKLPNGGAG PQNFANNAPP 840 TDYLETASSA TSVWLSQADG LLHPNFPMSN FSQQQLFKDA PPDTEIPAEI PSNNALFGIS 900 NDGHVGFPMV TDDFLTNGID AVKYENHIST DIDNNYRIPK DAQQEISSSM VSQSFGASDM 960 AFNSIDSGIN NGAFLNKSSW PPAPPVKRMR TFTKVYKRGA VGRSIDISQY AGYEELKHAL 1020 ARMFSIEGQL EERQRIGWKL VYRDHEDDIL LLGDDPWEEF VNCVKCIRIL SPQEVQQMSL 1080 DGDLGSSVVP NQACSSSEGG GNAWRARCDQ NSGNPSTGSY DQFE

Sequence ? help Back to Top

Protein Sequence Length: 1124 aa Download sequence

LVQLPPAGSL IVYFPQGHSE QVAASMQKDV DAHVPNYPNL PSKLICLLHN ITLHADLETD  60
EVYAQMTLQP VTSYGKEALQ LSELALKQAR PQNEFFCKTL TASDTSTHGG FSVPRRAAEK  120
IFPPLDFSMQ PPAQEIQARD LHDNVWTFRH IYRGQPKRHL LTTGWSLFVS GKRLFAGDSV  180
IFVRDERQQL LLGIRRANRQ PTNISSSVLS SDSMHIGILA AAAHAAANNS PFTIFYNPRA  240
SPTEFVIPFA KYQKAVYGNQ LSLGMRFRMM FETEELGTRR YMGTITGIND LDPVRWKNSQ  300
WRNLQVGWDE SAAGERRNRV SIWEIEPVAA PFFICPPPFF GAKRPRQLDD ESSEMENLLK  360
RAMPWLGEEI CIKDPQTQNT IMPGLSLVQW MNMNMQQSSS FANTAMQSEY LRSITNPSMQ  420
NIGSGDLSRQ LCLQNQLLQQ NNMQFNTPKL PHQMQPNNEL SKAALPLNQN GASIKPEEQT  480
QDASNFQRQQ QSMNYALPLS QAQTSLAQAQ VLIQSQMQQQ QQQQQQPHIP QNQLPTASQP  540
LLSHQQQQHH HQQQQHQQQE QQHQQQQQQK FLQQQQLLLQ QQQLQQHQHQ LQQQQQQQLS  600
KMPAQLPNMS NQQLQLSDQQ LQLQLLQKLQ QQQQSLLSQP GVTLAQLPLI QEQQKLLMDM  660
QQQLSSSHSL SQQQMMPQQS TKIPSHAASL PPPMQPDTTH QKLPQKQALP ADTLEAAIPT  720
TTSLKFSSAN GSPLRMPGAT HSVVTEEIPS CSTSPSTANG NHLLQPVPGR DQYPSMINTE  780
KAPHSTAPMS VPSSLDAVTG AQRMTKELPK LNSNVKQNMM PSKLPNGGAG PQNFANNAPP  840
TDYLETASSA TSVWLSQADG LLHPNFPMSN FSQQQLFKDA PPDTEIPAEI PSNNALFGIS  900
NDGHVGFPMV TDDFLTNGID AVKYENHIST DIDNNYRIPK DAQQEISSSM VSQSFGASDM  960
AFNSIDSGIN NGAFLNKSSW PPAPPVKRMR TFTKVYKRGA VGRSIDISQY AGYEELKHAL  1020
ARMFSIEGQL EERQRIGWKL VYRDHEDDIL LLGDDPWEEF VNCVKCIRIL SPQEVQQMSL  1080
DGDLGSSVVP NQACSSSEGG GNAWRARCDQ NSGNPSTGSY DQFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG050660.2