PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG050660.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 496aa    MW: 56356.6 Da    PI: 7.636
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG050660.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.82.1e-2353154199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae++       + +++  ++++ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F   
  TRIDC7BG050660.12  53 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV-- 140
                        99*****************************954.4444.48************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++++l+++++r+
  TRIDC7BG050660.12 141 RDERQQLLLGIRRA 154
                        4577888***9997 PP
2Auxin_resp119.42.9e-39179262183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+  +rr++Gt++g++dldpvrW+nS+Wr+L+
  TRIDC7BG050660.12 179 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQ 262
                        79**********************************9*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 496 aa     Download sequence    
MHTENDFYLS QADLETDEVY AQMTLQPVTS YGKEALQLSE LALKQARPQN EFFCKTLTAS  60
DTSTHGGFSV PRRAAEKIFP PLDFSMQPPA QEIQARDLHD NVWTFRHIYR GQPKRHLLTT  120
GWSLFVSGKR LFAGDSVIFV RDERQQLLLG IRRANRQPTN ISSSVLSSDS MHIGILAAAA  180
HAAANNSPFT IFYNPRASPT EFVIPFAKYQ KAVYGNQLSL GMRFRMMFET EELGTRRYMG  240
TITGINDLDP VRWKNSQWRN LQVGWDESAA GERRNRVSIW EIEPVAAPFF ICPPPFFGAK  300
RPRQLDDESS EMENLLKRAM PWLGEEICIK DPQTQNTIMP GLSLVQWMNM NMQQSSSFAN  360
TAMQSEYLRS ITNPSMQNIG SGDLSRQLCL QNQLLQQNNM QFNTPKLPHQ MQPNNELSKA  420
ALPLNQNGAS IKPEEQTQDA SNFQRQQQSM NYALPLSQAQ TSLAQAQVLI QSQMQQQQQQ  480
QQQPHIPQNQ LPTASQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.11e-167ARF family protein