PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG044180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 232aa MW: 24479.4 Da PI: 4.5242 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.6 | 6.5e-18 | 48 | 93 | 3 | 52 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++aa++ TRIDC7BG044180.1 48 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDAAALV 93 9****998.**********843...6*********************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
EMPDSELNSP ASSSASPPPS PTMARGGVME KRGRDAGGNG AGGRHPAYRG VRMRAWGKWV 60 SEIREPRKKS RIWLGTFPTP EMAARAHDAA ALVVKGPTAV LNFPELASSL PRAASAAPND 120 VQAAAARAAA MEPAPVGASV SAEPMPAAAT SPLWRRGEMS SQVDDELEEI IELPSIDEDI 180 AAAVEVAFGG TFCEDPVAEP WYEPTWLGEH AGIGSHDELA VSALGLEPYQ FW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 4e-27 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG044180.1 |