PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG042040.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 463aa MW: 52811.2 Da PI: 7.5899

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG042040.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73	6.4e-23	74	165	2	90
FAR1 2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn+YA +GF +r+++s+++ k ++ ++++fvC keg++++++ + ++k++r+r + r gC a+++v ++ +kw++tkl+leH+H ++ TRIDC7BG042040.9 74 FYNAYALGLGFGIRVARSRSErrKGSEVLVMKRFVCMKEGHHKKKDVEsSNKKKRKRLSIRDGCPAMMEVVRRGPEKWVITKLVLEHTHVIV 165 9***********99988883355567899******999887757889999*******************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
ELIEDFMDVE DDTSTADVDQ PTGVMASHIH CIDPSEGSMS TAGNELLPAA DELGKNAEPY 60 LGMEFVSDAA ARAFYNAYAL GLGFGIRVAR SRSERRKGSE VLVMKRFVCM KEGHHKKKDV 120 ESSNKKKRKR LSIRDGCPAM MEVVRRGPEK WVITKLVLEH THVIVSPDKV REVQLLRLSG 180 KEHADQLQEV RRNVFGDTGA SGLFTYLMRR QSENSGFFYN VQVDSGNCLR NAVWVDARSK 240 MSYKYFGDAV YFDTTYTQNE NMLPFAAFTG MNHHELSLTR RAETISRFYR NNFSTRAPLL 300 SFITTFDQHI DRLYMNEAQK DLASFPPEQL LKTNSILEKQ AASIYTRVAF EFFQTELIES 360 LHHYAVKVQE SPYEAKYYVE RDGDPPTRHT VVYNVAEKKA WCDCCRFAFS AILCRHVLGV 420 FILADIDMIP EPCITKRWTK KAKTGPVFVG RILVDEIRHA DSV

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

ELIEDFMDVE DDTSTADVDQ PTGVMASHIH CIDPSEGSMS TAGNELLPAA DELGKNAEPY  60
LGMEFVSDAA ARAFYNAYAL GLGFGIRVAR SRSERRKGSE VLVMKRFVCM KEGHHKKKDV  120
ESSNKKKRKR LSIRDGCPAM MEVVRRGPEK WVITKLVLEH THVIVSPDKV REVQLLRLSG  180
KEHADQLQEV RRNVFGDTGA SGLFTYLMRR QSENSGFFYN VQVDSGNCLR NAVWVDARSK  240
MSYKYFGDAV YFDTTYTQNE NMLPFAAFTG MNHHELSLTR RAETISRFYR NNFSTRAPLL  300
SFITTFDQHI DRLYMNEAQK DLASFPPEQL LKTNSILEKQ AASIYTRVAF EFFQTELIES  360
LHHYAVKVQE SPYEAKYYVE RDGDPPTRHT VVYNVAEKKA WCDCCRFAFS AILCRHVLGV  420
FILADIDMIP EPCITKRWTK KAKTGPVFVG RILVDEIRHA DSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	130	KKKDVESSNKKKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	1e-29	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG042040.9