PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG041270.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | G2-like | ||||||||
Protein Properties | Length: 413aa MW: 44572.2 Da PI: 5.2475 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.2 | 1.6e-27 | 181 | 235 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k++++WtpeLH+rFv+aveqL G++kA+P++ile+m++++Lt+++++SHLQkYR++ TRIDC7BG041270.1 181 KAKVDWTPELHRRFVQAVEQL-GIDKAVPSRILEIMGINSLTRHNIASHLQKYRSH 235 6799*****************.********************************86 PP | |||||||
2 | Myb_DNA-binding | 41.5 | 3e-13 | 184 | 233 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg + +t+ ++ s++qky+ TRIDC7BG041270.1 184 VDWTPELHRRFVQAVEQLGIDkaVPSRILEIMGiNSLTRHNIASHLQKYR 233 57***********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 413 aa Download sequence |
MLAVSSARCL AADADEQRAE VAPMETVGDA AVVVDLDIDF DFTVDDIDFG DFFLRLEDGD 60 ALPDLEVDPA DIFTDLEAAA AGVEEFQDQQ VPCAELLAAV EDVGSVSPAG GIIGVDNTAF 120 AESELGDEKR GCNQAEVGES MGGGDRPTVP DAKSPSSTTS SSTEAESRHK SSSKNSHGKK 180 KAKVDWTPEL HRRFVQAVEQ LGIDKAVPSR ILEIMGINSL TRHNIASHLQ KYRSHRKHMI 240 AREAEAASWT QRRQMYAAGG PAAAVKRQDS NMWTVPTIGF STPHPPPPPP AAAMQHYARP 300 LHVWGHPTMD SPRMPMWPRH PMPRAPMPAW APPPPPPSDP AFWHHPYMRG PAAYMPTHGT 360 PCMAMPMTPK FPAAPVPVAM PCPVYASPSP APALASKSQQ DSQLQLQAQP SNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20570.1 | 3e-47 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG041270.1 |