PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG038210.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 343aa MW: 37396 Da PI: 6.7024

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG038210.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	44.4	3e-14	239	325	3	87
EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 k+lt+sdv + gr+vlpkk ae+ + ++ ++ l++ d +W++k+++ ++ks++y+l ++eFvk +gL++gD ++++ ++ TRIDC7BG038210.4 239 KELTKSDVANVGRIVLPKKDAEASlpPLCERDPVILQMDDmVLPITWKFKYRFwpNNKSRMYILD-STSEFVKTHGLQAGDALIIY--KN 325 899****************98888666666766777775555***99777777777777.9**************998..44 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGGDGRPSDG GAGGGGGAGH PHQFQYQALL AAVHTQNPNH SHNLPFPLPP LNGPGPDAST 60 HNAARQPPTP RGFADWSAST SAFTSLAVQS TPSAATANAY HYSLSPCYAF WTHYMLNKNA 120 YSYYPAPNQE HTHPFSLDNN QAKDPGSIPS FGIESFNTTS LAPNMSAHMP PMEGPLPTKE 180 PEAPEDMPAR VATIKDEMDA RNGVELKCET VDALPELKQG HESCASKFNS GEYQVILRKE 240 LTKSDVANVG RIVLPKKDAE ASLPPLCERD PVILQMDDMV LPITWKFKYR FWPNNKSRMY 300 ILDSTSEFVK THGLQAGDAL IIYKNPVPGK YIVRGEKAIQ QTN

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGGDGRPSDG GAGGGGGAGH PHQFQYQALL AAVHTQNPNH SHNLPFPLPP LNGPGPDAST  60
HNAARQPPTP RGFADWSAST SAFTSLAVQS TPSAATANAY HYSLSPCYAF WTHYMLNKNA  120
YSYYPAPNQE HTHPFSLDNN QAKDPGSIPS FGIESFNTTS LAPNMSAHMP PMEGPLPTKE  180
PEAPEDMPAR VATIKDEMDA RNGVELKCET VDALPELKQG HESCASKFNS GEYQVILRKE  240
LTKSDVANVG RIVLPKKDAE ASLPPLCERD PVILQMDDMV LPITWKFKYR FWPNNKSRMY  300
ILDSTSEFVK THGLQAGDAL IIYKNPVPGK YIVRGEKAIQ QTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-34	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG038210.4