PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG035620.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 377aa MW: 41077.7 Da PI: 7.7401

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG035620.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.4	2.4e-52	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +ppGfrFhPt+eel+++yL+kkv++++++l +vi++vd++k+ePwd+++ k+ + +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk TRIDC7BG035620.4 11 VPPGFRFHPTEEELLNYYLRKKVASEEIDL-DVIRDVDLNKLEPWDIQErcKIGSgPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDK 102 69**************************.9***********963444443456****************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ + +g++ktLvfykgrap+g+k+dW+mheyrl TRIDC7BG035620.4 103 AIYN-AVKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139 .8899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MSISVNGQSC VPPGFRFHPT EEELLNYYLR KKVASEEIDL DVIRDVDLNK LEPWDIQERC 60 KIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKAIYNAVKR IGMRKTLVFY 120 KGRAPHGQKS DWIMHEYRLD DPSSTTDAAP TATMVRHAQV VSAATSSDAG QEDGWVVCRV 180 FKKKHHHKDA GAGSGKRGGG GRDDGGKAAR SSSPLYSSDD ALDQILHYMG RSCKQEHELS 240 SPRPRTAASR YLRPLETVLD GHGFMKLPAL ESPSAAATAR TSTTTPLAPS GDGNVERELA 300 HAEDLHQPHR DGGITDWAMM DRLVASHLNG QHDASTDQLC FDGTAGHTGG NDALNDTAVN 360 GLAYYSAAAT RLLGGAA

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MSISVNGQSC VPPGFRFHPT EEELLNYYLR KKVASEEIDL DVIRDVDLNK LEPWDIQERC  60
KIGSGPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKAIYNAVKR IGMRKTLVFY  120
KGRAPHGQKS DWIMHEYRLD DPSSTTDAAP TATMVRHAQV VSAATSSDAG QEDGWVVCRV  180
FKKKHHHKDA GAGSGKRGGG GRDDGGKAAR SSSPLYSSDD ALDQILHYMG RSCKQEHELS  240
SPRPRTAASR YLRPLETVLD GHGFMKLPAL ESPSAAATAR TSTTTPLAPS GDGNVERELA  300
HAEDLHQPHR DGGITDWAMM DRLVASHLNG QHDASTDQLC FDGTAGHTGG NDALNDTAVN  360
GLAYYSAAAT RLLGGAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	5e-95	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG035620.4