PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG030830.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 610aa MW: 65983.9 Da PI: 6.464

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG030830.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.1	2.6e-15	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+ E++++++a k++G W +I +++g ++t+ q++s+ qk+ TRIDC7BG030830.5 24 RERWTEAEHKRFLEALKLYGRA-WQRIEEHVG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence
MEINSSGEET VIKVRKPYTI TKQRERWTEA EHKRFLEALK LYGRAWQRIE EHVGTKTAVQ 60 IRSHAQKFFT KLEKEAINNG TSPGQAHDID IPPPRPKRKP NCPYPRKGCL SSETPTREVP 120 KSSVSLSNSN AEMASNGTLQ LTCIQKLQRK ELSENGSCSE VINIFREAPS ASFSSSNKSS 180 SNHGVSGGIE PTKTENKDIA TMERKSTSID VGKDVKDIND QEMERNNRVH ISSNYGRSHE 240 DCLDNSMKHM QLKPNTAETT YTGQHAASAP LYQMNKTGAT GAPDPGTEGS HPDQTSDQAG 300 GANGSMDCIH PTLPVDPKIG SSSTAQPFPH NYAGFAPTMQ CHCNQDANRS SLNMSSTFSN 360 MLVSTLLSNP TVHAAARLAA SYWPAADSNI PVGPNQEVFA ENAQGRHIGS PPSMASVVAA 420 TVAAASAWWA TQGLLPLFAP PMAFPFVPVP TASFPIADVQ RATENCPVDN APKECQVAQE 480 QGQPEAMIVG ASSGSDESGK GEVSPHTDKV ETTPPTGAET SDAFGNKKKQ DRSSCGSNTP 540 SSSDVEAEHV PENQDQANDK TQQACCSNSS AGDMNHRRFR NISSTNDSWK EVSEEVVVYQ 600 HCRTSFLCYS

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence

MEINSSGEET VIKVRKPYTI TKQRERWTEA EHKRFLEALK LYGRAWQRIE EHVGTKTAVQ  60
IRSHAQKFFT KLEKEAINNG TSPGQAHDID IPPPRPKRKP NCPYPRKGCL SSETPTREVP  120
KSSVSLSNSN AEMASNGTLQ LTCIQKLQRK ELSENGSCSE VINIFREAPS ASFSSSNKSS  180
SNHGVSGGIE PTKTENKDIA TMERKSTSID VGKDVKDIND QEMERNNRVH ISSNYGRSHE  240
DCLDNSMKHM QLKPNTAETT YTGQHAASAP LYQMNKTGAT GAPDPGTEGS HPDQTSDQAG  300
GANGSMDCIH PTLPVDPKIG SSSTAQPFPH NYAGFAPTMQ CHCNQDANRS SLNMSSTFSN  360
MLVSTLLSNP TVHAAARLAA SYWPAADSNI PVGPNQEVFA ENAQGRHIGS PPSMASVVAA  420
TVAAASAWWA TQGLLPLFAP PMAFPFVPVP TASFPIADVQ RATENCPVDN APKECQVAQE  480
QGQPEAMIVG ASSGSDESGK GEVSPHTDKV ETTPPTGAET SDAFGNKKKQ DRSSCGSNTP  540
SSSDVEAEHV PENQDQANDK TQQACCSNSS AGDMNHRRFR NISSTNDSWK EVSEEVVVYQ  600
HCRTSFLCYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	2e-41	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG030830.5