PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG030830.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 706aa MW: 76413.6 Da PI: 6.6745

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG030830.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.9	3.2e-15	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+ E++++++a k++G W +I +++g ++t+ q++s+ qk+ TRIDC7BG030830.4 24 RERWTEAEHKRFLEALKLYGRA-WQRIEEHVG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
MEINSSGEET VIKVRKPYTI TKQRERWTEA EHKRFLEALK LYGRAWQRIE EHVGTKTAVQ 60 IRSHAQKFFT KLEKEAINNG TSPGQAHDID IPPPRPKRKP NCPYPRKGCL SSETPTREVP 120 KSSVSLSNSN AEMASNGTLQ KLQRKELSEN GSCSEVINIF REAPSASFSS SNKSSSNHGV 180 SGGIEPTKTE NKDIATMERK STSIDVGKDV KDINDQEMER NNRVHISSNY GRSHEDCLDN 240 SMKHMQLKPN TAETTYTGQH AASAPLYQMN KTGATGAPDP GTEGSHPDQT SDQAGGANGS 300 MDCIHPTLPV DPKIGSSSTA QPFPHNYAGF APTMQCHCNQ DANRSSLNMS STFSNMLVST 360 LLSNPTVHAA ARLAASYWPA ADSNIPVGPN QEVFAENAQG RHIGSPPSMA SVVAATVAAA 420 SAWWATQGLL PLFAPPMAFP FVPVPTASFP IADVQRATEN CPVDNAPKEC QVAQEQGQPE 480 AMIVGASSGS DESGKGEVSP HTDKVETTPP TGAETSDAFG NKKKQDRSSC GSNTPSSSDV 540 EAEHVPENQD QANDKTQQAC CSNSSAGDMN HRRFRNISST NDSWKEVSEE GRMAFDKLFS 600 RGKLPQSFSP PQAEGLKVVP RGEQDEATTV TVDLNKSAAV IDHELDTLVG PRAATFPIEL 660 SHLNMKSRRT GFKPYKRCSV EAKENRVPAA DEVGTKRIRL DSEPST

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

MEINSSGEET VIKVRKPYTI TKQRERWTEA EHKRFLEALK LYGRAWQRIE EHVGTKTAVQ  60
IRSHAQKFFT KLEKEAINNG TSPGQAHDID IPPPRPKRKP NCPYPRKGCL SSETPTREVP  120
KSSVSLSNSN AEMASNGTLQ KLQRKELSEN GSCSEVINIF REAPSASFSS SNKSSSNHGV  180
SGGIEPTKTE NKDIATMERK STSIDVGKDV KDINDQEMER NNRVHISSNY GRSHEDCLDN  240
SMKHMQLKPN TAETTYTGQH AASAPLYQMN KTGATGAPDP GTEGSHPDQT SDQAGGANGS  300
MDCIHPTLPV DPKIGSSSTA QPFPHNYAGF APTMQCHCNQ DANRSSLNMS STFSNMLVST  360
LLSNPTVHAA ARLAASYWPA ADSNIPVGPN QEVFAENAQG RHIGSPPSMA SVVAATVAAA  420
SAWWATQGLL PLFAPPMAFP FVPVPTASFP IADVQRATEN CPVDNAPKEC QVAQEQGQPE  480
AMIVGASSGS DESGKGEVSP HTDKVETTPP TGAETSDAFG NKKKQDRSSC GSNTPSSSDV  540
EAEHVPENQD QANDKTQQAC CSNSSAGDMN HRRFRNISST NDSWKEVSEE GRMAFDKLFS  600
RGKLPQSFSP PQAEGLKVVP RGEQDEATTV TVDLNKSAAV IDHELDTLVG PRAATFPIEL  660
SHLNMKSRRT GFKPYKRCSV EAKENRVPAA DEVGTKRIRL DSEPST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	7e-41	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG030830.4