PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG024680.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 858aa MW: 89637 Da PI: 10.0367

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG024680.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.9	4e-07	206	250	2	44
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 ++W+ Ed l d+v++ G g+W I r+ + +Rt q+ rw TRIDC7BG024680.4 206 KAWSNKEDADLMDGVHKCGEGNWLNILRKYNfdSTRTYVQLSQRW 250 58***************************************9999 PP

Sequence ? help Back to Top
Protein Sequence Length: 858 aa Download sequence
VTNFEMVAAA AAGKRKQDLS EDEVYLILHK YSPATILTVL QEVAQHAERR SIDWRALVAK 60 TATGITSARE YQMLWRYIAY RHDFIENAED IGAQPLGDES DLECEIEPFP KPSNEAAAEA 120 SRFAKILIYG PSREQGSSHR VNSEVPLLNT PNEKIPRVPS DKQLAQSHRL TNSTGPVSNS 180 KQASHTGLSP DPFDGNGPHK KTKKPKAWSN KEDADLMDGV HKCGEGNWLN ILRKYNFDST 240 RTYVQLSQRW AVICRRQGTT KLAKVKSVTT EFDIKATQKA FSMALDMPMG KPGGFSTLRL 300 GASQQSAQHP APVFVAAAPE LKCATSSSSF PLPVPAPAQG QIPLPRVQPA PAQAAASKVS 360 NTSNKSQNSS KKQNAQANPT NAPSSIQAAA IAAGGRIAPA SIATDLLKAA QSSQAVHITP 420 KAKHIRPRGK GSSKTSTSSK ASTMAGEPGT QPGSAEHPEL PNCSAPTPSP PVLITQSIEQ 480 VNVVSEVAGV NPTEQSASAH LLEPDRALST TPVSGPCDNM EMDDDSTFCA VTMEDLFPED 540 VKQPEMVKQP EIVKQYEMID PKAEESIDPK DADMLEFDRF VAQGCLTTDC LDKSKGVKIA 600 PGAQGAIPSQ KKQQPTVVKS IPASARAPAT VKKTKTLASH GATFPSTVTS SGLVGTGNAG 660 VLSKAIYRKP PGPGTTGKQN RCQEIMAQKQ HAMSSNSSAL ARNAAPGVGT PARNAAPGVG 720 TPARNAAPGV GTPAKNMSPG AGTPVRNAVP ATGTLAKNMA PATGAPARNA APGTGITPAR 780 SLLTGTGTPP ARNSLTGTAT PPVRTAAPGT GTPPVRNPAP SAGTPPGRNS LTGTGTPASR 840 QYTPVVNGAS KGNPPASQ

Sequence ? help Back to Top

Protein Sequence Length: 858 aa Download sequence

VTNFEMVAAA AAGKRKQDLS EDEVYLILHK YSPATILTVL QEVAQHAERR SIDWRALVAK  60
TATGITSARE YQMLWRYIAY RHDFIENAED IGAQPLGDES DLECEIEPFP KPSNEAAAEA  120
SRFAKILIYG PSREQGSSHR VNSEVPLLNT PNEKIPRVPS DKQLAQSHRL TNSTGPVSNS  180
KQASHTGLSP DPFDGNGPHK KTKKPKAWSN KEDADLMDGV HKCGEGNWLN ILRKYNFDST  240
RTYVQLSQRW AVICRRQGTT KLAKVKSVTT EFDIKATQKA FSMALDMPMG KPGGFSTLRL  300
GASQQSAQHP APVFVAAAPE LKCATSSSSF PLPVPAPAQG QIPLPRVQPA PAQAAASKVS  360
NTSNKSQNSS KKQNAQANPT NAPSSIQAAA IAAGGRIAPA SIATDLLKAA QSSQAVHITP  420
KAKHIRPRGK GSSKTSTSSK ASTMAGEPGT QPGSAEHPEL PNCSAPTPSP PVLITQSIEQ  480
VNVVSEVAGV NPTEQSASAH LLEPDRALST TPVSGPCDNM EMDDDSTFCA VTMEDLFPED  540
VKQPEMVKQP EIVKQYEMID PKAEESIDPK DADMLEFDRF VAQGCLTTDC LDKSKGVKIA  600
PGAQGAIPSQ KKQQPTVVKS IPASARAPAT VKKTKTLASH GATFPSTVTS SGLVGTGNAG  660
VLSKAIYRKP PGPGTTGKQN RCQEIMAQKQ HAMSSNSSAL ARNAAPGVGT PARNAAPGVG  720
TPARNAAPGV GTPAKNMSPG AGTPVRNAVP ATGTLAKNMA PATGAPARNA APGTGITPAR  780
SLLTGTGTPP ARNSLTGTAT PPVRTAAPGT GTPPVRNPAP SAGTPPGRNS LTGTGTPASR  840
QYTPVVNGAS KGNPPASQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	3e-43	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG024680.4