PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG022840.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 608aa MW: 63621.1 Da PI: 10.2149

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG022840.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.6	6.7e-09	26	75	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqk 46 W t E++ll++av ++G+ +W+++a +++ ++t+ +c++r++ TRIDC7BG022840.3 26 WGTLEELLLACAVSRHGTASWESVALEVQsrspsaaARLTPTSCRLRFRL 75 9999******************************99*******985 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MAARSDDPDV SPESSSPAAA AGGEIWGTLE ELLLACAVSR HGTASWESVA LEVQSRSPSA 60 AARLTPTSCR LRFRLLHRRF AAVADEDGGG EPDPNAAVSD AWVDELRKLR VAELRREVER 120 YDLSIGSLQS KVKRLKEERE RSLSGETTPA FKDERETGNE SPEEAGGENG LSGAAADGDA 180 EAKDEPAAGD MAAKDEASGE SAAGSKEADA VKESSDVQSS ASPSHKRRRR LRKVGGGDLA 240 STSAPVPLPA AEAEPLLAFL ESVRTSKSGA VFERRLESQE SGKYKGTIRR HVDLEMIGSR 300 LESGGAAGGP DSACYASASE FFRDLLLLCA NALVFFPRGS PEHAAATRTR ALVSKRISAT 360 LQRDGLETVG KAAALVGGGS SAGGAKKAKA DAEVAGSLLE KAAPIIVCRK RSSIAKAAAA 420 NKEKVEKEDT DEDEEFDEGK KKGNAKDKAR GMRTNKGRAP VRNAAPNQKT GKALEGAAAD 480 ERTKKSDKMG GSGSGGKAAA AAAAAGGVIK KRNAVDFLKR MKQNSVPSTE RVSLLETLKL 540 SATEQKKAAK ADGRKEPGSS SGSKKAAETA SGGRRSVGRP PKRAAAPPTP PPSKRVKDDR 600 PTRKRGKK

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MAARSDDPDV SPESSSPAAA AGGEIWGTLE ELLLACAVSR HGTASWESVA LEVQSRSPSA  60
AARLTPTSCR LRFRLLHRRF AAVADEDGGG EPDPNAAVSD AWVDELRKLR VAELRREVER  120
YDLSIGSLQS KVKRLKEERE RSLSGETTPA FKDERETGNE SPEEAGGENG LSGAAADGDA  180
EAKDEPAAGD MAAKDEASGE SAAGSKEADA VKESSDVQSS ASPSHKRRRR LRKVGGGDLA  240
STSAPVPLPA AEAEPLLAFL ESVRTSKSGA VFERRLESQE SGKYKGTIRR HVDLEMIGSR  300
LESGGAAGGP DSACYASASE FFRDLLLLCA NALVFFPRGS PEHAAATRTR ALVSKRISAT  360
LQRDGLETVG KAAALVGGGS SAGGAKKAKA DAEVAGSLLE KAAPIIVCRK RSSIAKAAAA  420
NKEKVEKEDT DEDEEFDEGK KKGNAKDKAR GMRTNKGRAP VRNAAPNQKT GKALEGAAAD  480
ERTKKSDKMG GSGSGGKAAA AAAAAGGVIK KRNAVDFLKR MKQNSVPSTE RVSLLETLKL  540
SATEQKKAAK ADGRKEPGSS SGSKKAAETA SGGRRSVGRP PKRAAAPPTP PPSKRVKDDR  600
PTRKRGKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	226	231	KRRRRL
2	227	233	RRRRLRK
3	228	233	RRRLRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	1e-18	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG022840.3