PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG022840.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 633aa MW: 66116.7 Da PI: 10.107 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.6 | 7e-09 | 26 | 75 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqk 46 W t E++ll++av ++G+ +W+++a +++ ++t+ +c++r++ TRIDC7BG022840.2 26 WGTLEELLLACAVSRHGTASWESVALEVQsrspsaaARLTPTSCRLRFRL 75 9999********************************99*********985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 633 aa Download sequence |
MAARSDDPDV SPESSSPAAA AGGEIWGTLE ELLLACAVSR HGTASWESVA LEVQSRSPSA 60 AARLTPTSCR LRFRLLHRRF AAVADEDGGG EPDPNAAVSD AWVDELRKLR VAELRREVER 120 YDLSIGSLQS KVKRLKEERE RSLSGETTPA FKDERETGNE SPEEAGGENG LSGEASARSC 180 KESNSSDLKP PPGHDSGGAA ADGDAEAKDE PAAGDMAAKD EASGESAAGS KEADAVKESS 240 DVQSSASPSH KRRRRLRKVG GGDLASTSAP VPLPAAEAEP LLAFLESVRT SKSGAVFERR 300 LESQESGKYK GTIRRHVDLE MIGSRLESGG AAGGPDSACY ASASEFFRDL LLLCANALVF 360 FPRGSPEHAA ATRTRALVSK RISATLQRDG LETVGKAAAL VGGGSSAGGA KKAKADAEVA 420 GSLLEKAAPI IVCRKRSSIA KAAAANKEKV EKEDTDEDEE FDEGKKKGNA KDKARGMRTN 480 KGRAPVRNAA PNQKTGKALE GAAADERTKK SDKMGGSGSG GKAAAAAAAA GGVIKKRNAV 540 DFLKRMKQNS VPSTERVSLL ETLKLSATEQ KKAAKADGRK EPGSSSGSKK AAETASGGRR 600 SVGRPPKRAA APPTPPPSKR VKDDRPTRKR GKK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 251 | 256 | KRRRRL |
2 | 252 | 258 | RRRRLRK |
3 | 253 | 258 | RRRLRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57980.1 | 1e-18 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG022840.2 |