PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG022840.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 350aa MW: 37464.5 Da PI: 6.2036

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG022840.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.7	3.1e-09	26	75	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqk 46 W t E++ll++av ++G+ +W+++a +++ ++t+ +c++r++ TRIDC7BG022840.1 26 WGTLEELLLACAVSRHGTASWESVALEVQsrspsaaARLTPTSCRLRFRL 75 9999******************************99*******985 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MAARSDDPDV SPESSSPAAA AGGEIWGTLE ELLLACAVSR HGTASWESVA LEVQSRSPSA 60 AARLTPTSCR LRFRLLHRRF AAVADEDGGG EPDPNAAVSD AWVDELRKLR VAELRREVER 120 YDLSIGSLQS KVKRLKEERE RSLSGETTPA FKDERETGNE SPEEAGGENG LSGEASARSC 180 KESNSSDLKP PPGHDSGGAA ADGDAEAKDE PAAGDMAAKD EASGESAAGS KEADAVKESS 240 DVQSSASPSH KRRRRLRKVG GGDLASTSAP VPLPAAEAEP LLAFLESVRT SKSGAVFERR 300 LESQVKNFSR FLFFSWKKSL IYPFPPSLPS VKKRHKCSIH HLVQRNSYLG

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MAARSDDPDV SPESSSPAAA AGGEIWGTLE ELLLACAVSR HGTASWESVA LEVQSRSPSA  60
AARLTPTSCR LRFRLLHRRF AAVADEDGGG EPDPNAAVSD AWVDELRKLR VAELRREVER  120
YDLSIGSLQS KVKRLKEERE RSLSGETTPA FKDERETGNE SPEEAGGENG LSGEASARSC  180
KESNSSDLKP PPGHDSGGAA ADGDAEAKDE PAAGDMAAKD EASGESAAGS KEADAVKESS  240
DVQSSASPSH KRRRRLRKVG GGDLASTSAP VPLPAAEAEP LLAFLESVRT SKSGAVFERR  300
LESQVKNFSR FLFFSWKKSL IYPFPPSLPS VKKRHKCSIH HLVQRNSYLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	256	KRRRRL
2	252	258	RRRRLRK
3	253	258	RRRLRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	7e-17	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG022840.1