PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG021980.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 1092aa MW: 121279 Da PI: 6.5654

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG021980.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	64.8	1.3e-20	128	229	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++p++ ae++ +++++ ++l+ +d++ W++++i+r++++r++lt+GW+ F + ++L +gD+v+F ++ TRIDC7BG021980.5 128 FCKTLTASDTSTHGGFSVPRRAAERIfprldfSLQPPA-QELQARDLHDTIWTFRHIFRGQPRRHLLTTGWSLFISGKRLLAGDSVLFI--RD 217 99***************************9777665.49**********************************************..45 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 +++l+++++r+ TRIDC7BG021980.5 218 AKQQLLLGIRRA 229 677789999997 PP
2	Auxin_resp	118.3	6.1e-39	254	337	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s F+++YnPras+seFv++++k++ka++ +++s+GmRf+m+fete+s +rr++Gt++g+sdldpvrW+nS+Wr+++ TRIDC7BG021980.5 254 AAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYgNQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNIQ 337 79********************************9******************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1092 aa Download sequence
TMAAPEGSGA GGGEGARGSK VNQELWYACA GPLVALPPPG SLVVYFPQGH SEQVAASMRK 60 DADAQIPSYP NLPSKLICIL HSVTMQSDPD TDEVYARMTL QPVTQCDKEI LLASELALKQ 120 NKPQTEFFCK TLTASDTSTH GGFSVPRRAA ERIFPRLDFS LQPPAQELQA RDLHDTIWTF 180 RHIFRGQPRR HLLTTGWSLF ISGKRLLAGD SVLFIRDAKQ QLLLGIRRAN RQPTNLSSSV 240 LSSDSMHIGV LAAAAHAAAN NSQFTIFYNP RASPSEFVIP FAKYQKAVYG NQLSLGMRFR 300 MMFETEESGT RRYMGTITGI SDLDPVRWKN SQWRNIQVAW DEAAPSERRT RVSLWDIEPV 360 IAPFFIYPTP LFTAKRARQP GMIDDDTSGM DNLFKRTMPW LGEEICKKDM NTQNSIVPGL 420 NLAQSLQWMN MQQNLSLAGT VMQPELLNSL AGKHVQNLSA ADISRQISFQ PQFLQQNNIQ 480 FNTSLLPQQN QQAEQLAKAI GTPNQLGNIM VPQKVDQDCN SDQKQHTVTQ SVQGSQANLN 540 VTQPEHVVQA QFQQPRVILQ AQLQQQQPLV QSHTVFQGGL QQIQVLQQQQ PHLQQQLQQQ 600 QPQHHQQVQH SVQEQQQMKI QPVHVSSDVN MNTQLSDHQM KLQLLKALHS QQHLTTEQQK 660 MLFDLQQQVV NSQSDPQQCV QGATQTVGFH NRNTIQYATQ QKAQSHQPVD DSPRGTIPVA 720 KSDVVTSMGA SSLNVAGRMQ SVRTDNVPSS STSPSPSTAT NHVLLQSIPS SSKNQSLPTA 780 AKTSQSSVVL GPTIEQEMKS YQSVKPTIMI PKMIEQGPAT ERDYINNPHM DYLDTSSSAT 840 SVCLSQADGS LQQNFPSSSF DQHQLLRDTA PDSEFEISDP TNNLLFGVNI DGQLGLPLNA 900 DALLANSIEN DKFMDEMAGN GISNYISSKD SQQELSSSMI SHSLGVADMG FNSIDSAIND 960 PSFLNRNSRA PAPAHQRMRT YTKVHKRGAV GRSIDMNRYS GYDELKHDIA RMFGIEGQLG 1020 DQSRVGWKLV YEDHEKDVLL VGDDPWEDFL NCVRCIRILS PQEEMQMRLV GDFGDGFLPN 1080 QACSSSDGGQ PW

Sequence ? help Back to Top

Protein Sequence Length: 1092 aa Download sequence

TMAAPEGSGA GGGEGARGSK VNQELWYACA GPLVALPPPG SLVVYFPQGH SEQVAASMRK  60
DADAQIPSYP NLPSKLICIL HSVTMQSDPD TDEVYARMTL QPVTQCDKEI LLASELALKQ  120
NKPQTEFFCK TLTASDTSTH GGFSVPRRAA ERIFPRLDFS LQPPAQELQA RDLHDTIWTF  180
RHIFRGQPRR HLLTTGWSLF ISGKRLLAGD SVLFIRDAKQ QLLLGIRRAN RQPTNLSSSV  240
LSSDSMHIGV LAAAAHAAAN NSQFTIFYNP RASPSEFVIP FAKYQKAVYG NQLSLGMRFR  300
MMFETEESGT RRYMGTITGI SDLDPVRWKN SQWRNIQVAW DEAAPSERRT RVSLWDIEPV  360
IAPFFIYPTP LFTAKRARQP GMIDDDTSGM DNLFKRTMPW LGEEICKKDM NTQNSIVPGL  420
NLAQSLQWMN MQQNLSLAGT VMQPELLNSL AGKHVQNLSA ADISRQISFQ PQFLQQNNIQ  480
FNTSLLPQQN QQAEQLAKAI GTPNQLGNIM VPQKVDQDCN SDQKQHTVTQ SVQGSQANLN  540
VTQPEHVVQA QFQQPRVILQ AQLQQQQPLV QSHTVFQGGL QQIQVLQQQQ PHLQQQLQQQ  600
QPQHHQQVQH SVQEQQQMKI QPVHVSSDVN MNTQLSDHQM KLQLLKALHS QQHLTTEQQK  660
MLFDLQQQVV NSQSDPQQCV QGATQTVGFH NRNTIQYATQ QKAQSHQPVD DSPRGTIPVA  720
KSDVVTSMGA SSLNVAGRMQ SVRTDNVPSS STSPSPSTAT NHVLLQSIPS SSKNQSLPTA  780
AKTSQSSVVL GPTIEQEMKS YQSVKPTIMI PKMIEQGPAT ERDYINNPHM DYLDTSSSAT  840
SVCLSQADGS LQQNFPSSSF DQHQLLRDTA PDSEFEISDP TNNLLFGVNI DGQLGLPLNA  900
DALLANSIEN DKFMDEMAGN GISNYISSKD SQQELSSSMI SHSLGVADMG FNSIDSAIND  960
PSFLNRNSRA PAPAHQRMRT YTKVHKRGAV GRSIDMNRYS GYDELKHDIA RMFGIEGQLG  1020
DQSRVGWKLV YEDHEKDVLL VGDDPWEDFL NCVRCIRILS PQEEMQMRLV GDFGDGFLPN  1080
QACSSSDGGQ PW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG021980.5