PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG018990.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 396aa    MW: 46719.4 Da    PI: 7.9257
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG018990.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.96.2e-105595346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      +WT eE e++ + v++ G++ Wkt a+++g  +++ ++k+ w+ 
  TRIDC7BG018990.8 55 KWTHEEKEQIQQFVEKNGTD-WKTLAQELG--KSEIHVKHAWRR 95
                      8*******************.********8..9*******9986 PP
2Myb_DNA-binding29.91.3e-09195236347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT +E e++ + v+  G++ Wkt ar++g  +++ ++k+ w+  
  TRIDC7BG018990.8 195 KWTDDEKEKIRRFVEINGTD-WKTLARELG--KSEIHVKDTWRRM 236
                       8*******************.********8..9*******99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MKQLGEKGLE MIGSCCKYPE LKGCWDDIAK SLPHRPYLAI YRRAHTLLYR STGCKWTHEE  60
KEQIQQFVEK NGTDWKTLAQ ELGKSEIHVK HAWRRIKPKK KKGADDEEDV SGSESELVHG  120
HRFTAEEDAI LMEAMRDYAE LKQLGEKGLE MIGSCSKYPE LKGCWDDIAK SLPHRPHEAI  180
YHRARILLYR GAERKWTDDE KEKIRRFVEI NGTDWKTLAR ELGKSEIHVK DTWRRMKPKN  240
LKKGRWTQDE HQNLFDLVNL DLRLKAHQIK NPDHRMLRDN ISWEAISDKL TTRNHKNCCL  300
KWYETLASPM VKEGIWSDVD DYLLVEALQK VDAVCIEDVD WDSLLDHRSG EVCRQRWNQM  360
VRAIGGHREK PFIEQVEVLS RRYCPEMIEY RSEEKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-101MYB_related family protein