PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG018990.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 628aa MW: 71666.8 Da PI: 9.0818

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG018990.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.1	1.1e-09	287	327	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE e++ + v++ G++ Wkt a+++g +++ ++k+ w+ TRIDC7BG018990.3 287 KWTHEEKEQIQQFVEKNGTD-WKTLAQELG--KSEIHVKHAWRR 327 8*****************.****8..9*****9986 PP
2	Myb_DNA-binding	29	2.4e-09	427	468	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E e++ + v+ G++ Wkt ar++g +++ ++k+ w+ TRIDC7BG018990.3 427 KWTDDEKEKIRRFVEINGTD-WKTLARELG--KSEIHVKDTWRRM 468 8*****************.****8..9*****99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
GQKQTFDTTV ENSGAEPTER DTVDGKQSSK SKKSKRKHND GAPAVEVSAG DQIVTREDKK 60 RRKEPVVLEA SNQTQNTNEG ENREIKKRGK ESSKASPDFS ENASAGGVEA GLGVNNDKKK 120 KKSKGIGGGK KKKEKAARST KGKRVSSADS VEMFRTEGGD GDGIGGRKKK EKAAPSKKKG 180 KRVSFADSAE VFSIEGGNNE EDVSSDESKR VHGRFTPEED ATLMEAMRGY AEMKQLGEKG 240 LEMIGSCCKY PELKGCWDDI AKSLPHRPYL AIYRRAHTLL YRSTGCKWTH EEKEQIQQFV 300 EKNGTDWKTL AQELGKSEIH VKHAWRRIKP KKKKGADDEE DVSGSESELV HGHRFTAEED 360 AILMEAMRDY AELKQLGEKG LEMIGSCSKY PELKGCWDDI AKSLPHRPHE AIYHRARILL 420 YRGAERKWTD DEKEKIRRFV EINGTDWKTL ARELGKSEIH VKDTWRRMKP KNLKKGRWTQ 480 DEHQNLFDLV NLDLRLKAHQ IKNPDHRMLR DNISWEAISD KLTTRNHKNC CLKWYETLAS 540 PMVKEGIWSD VDDYLLVEAL QKVDAVCIED VDWDSLLDHR SGEVCRQRWN QMVRAIGGHR 600 EKPFIEQVEV LSRRYCPEMI EYRSEEKV

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

GQKQTFDTTV ENSGAEPTER DTVDGKQSSK SKKSKRKHND GAPAVEVSAG DQIVTREDKK  60
RRKEPVVLEA SNQTQNTNEG ENREIKKRGK ESSKASPDFS ENASAGGVEA GLGVNNDKKK  120
KKSKGIGGGK KKKEKAARST KGKRVSSADS VEMFRTEGGD GDGIGGRKKK EKAAPSKKKG  180
KRVSFADSAE VFSIEGGNNE EDVSSDESKR VHGRFTPEED ATLMEAMRGY AEMKQLGEKG  240
LEMIGSCCKY PELKGCWDDI AKSLPHRPYL AIYRRAHTLL YRSTGCKWTH EEKEQIQQFV  300
EKNGTDWKTL AQELGKSEIH VKHAWRRIKP KKKKGADDEE DVSGSESELV HGHRFTAEED  360
AILMEAMRDY AELKQLGEKG LEMIGSCSKY PELKGCWDDI AKSLPHRPHE AIYHRARILL  420
YRGAERKWTD DEKEKIRRFV EINGTDWKTL ARELGKSEIH VKDTWRRMKP KNLKKGRWTQ  480
DEHQNLFDLV NLDLRLKAHQ IKNPDHRMLR DNISWEAISD KLTTRNHKNC CLKWYETLAS  540
PMVKEGIWSD VDDYLLVEAL QKVDAVCIED VDWDSLLDHR SGEVCRQRWN QMVRAIGGHR  600
EKPFIEQVEV LSRRYCPEMI EYRSEEKV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	59	63	KKRRK
2	118	133	KKKKKSKGIGGGKKKK
3	119	134	KKKKKSKGIGGGKKKK
4	130	172	KKKKEKAARSTKGKRVSSADSVEMFRTEGGDGDGIGGRKKKEK
5	167	172	RKKKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-100	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG018990.3