PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG018990.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 488aa MW: 55458.4 Da PI: 9.5304

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG018990.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.5	1.7e-09	287	328	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E e++ + v+ G++ Wkt ar++g +++ ++k+ w+ TRIDC7BG018990.2 287 KWTDDEKEKIRRFVEINGTD-WKTLARELG--KSEIHVKDTWRRM 328 8*****************.****8..9*****99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
GQKQTFDTTV ENSGAEPTER DTVDGKQSSK SKKSKRKHND GAPAVEVSAG DQIVTREDKK 60 RRKEPVVLEA SNQTQNTNEG ENREIKKRGK ESSKASPDFS ENASAGGVEA GLGVNNDKKK 120 KKSKGIGGGK KKKEKAARST KGKRVSSADS VEMFRTEGGD GDGIGGRKKK EKAAPSKKKG 180 KRVSFADSAE VFSIEGGNNE EDVSSDESKR VHGRFTPEED ATLMEAMRGY AEMKQLGEKG 240 LEMIGSCCKY PELKGCWDDI AKSLPHRPHE AIYHRARILL YRGAERKWTD DEKEKIRRFV 300 EINGTDWKTL ARELGKSEIH VKDTWRRMKP KNLKKGRWTQ DEHQNLFDLV NLDLRLKAHQ 360 IKNPDHRMLR DNISWEAISD KLTTRNHKNC CLKWYETLAS PMVKEGIWSD VDDYLLVEAL 420 QKVDAVCIED VDWDSLLDHR SGEVCRQRWN QMVRAIGGHR EKPFIEQVEV LSRRYCPEMI 480 EYRSEEKV

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

GQKQTFDTTV ENSGAEPTER DTVDGKQSSK SKKSKRKHND GAPAVEVSAG DQIVTREDKK  60
RRKEPVVLEA SNQTQNTNEG ENREIKKRGK ESSKASPDFS ENASAGGVEA GLGVNNDKKK  120
KKSKGIGGGK KKKEKAARST KGKRVSSADS VEMFRTEGGD GDGIGGRKKK EKAAPSKKKG  180
KRVSFADSAE VFSIEGGNNE EDVSSDESKR VHGRFTPEED ATLMEAMRGY AEMKQLGEKG  240
LEMIGSCCKY PELKGCWDDI AKSLPHRPHE AIYHRARILL YRGAERKWTD DEKEKIRRFV  300
EINGTDWKTL ARELGKSEIH VKDTWRRMKP KNLKKGRWTQ DEHQNLFDLV NLDLRLKAHQ  360
IKNPDHRMLR DNISWEAISD KLTTRNHKNC CLKWYETLAS PMVKEGIWSD VDDYLLVEAL  420
QKVDAVCIED VDWDSLLDHR SGEVCRQRWN QMVRAIGGHR EKPFIEQVEV LSRRYCPEMI  480
EYRSEEKV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	59	63	KKRRK
2	118	133	KKKKKSKGIGGGKKKK
3	119	134	KKKKKSKGIGGGKKKK
4	130	172	KKKKEKAARSTKGKRVSSADSVEMFRTEGGDGDGIGGRKKKEK
5	167	172	RKKKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	1e-103	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG018990.2