PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG018990.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 259aa MW: 30918.4 Da PI: 8.4752 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.7 | 7.1e-10 | 58 | 99 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E e++ + v+ G++ Wkt ar++g +++ ++k+ w+ TRIDC7BG018990.10 58 KWTDDEKEKIRRFVEINGTD-WKTLARELG--KSEIHVKDTWRRM 99 8*******************.********8..9*******99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
RRELKQLGEK GLEMIGSCSK YPELKGCWDD IAKSLPHRPH EAIYHRARIL LYRGAERKWT 60 DDEKEKIRRF VEINGTDWKT LARELGKSEI HVKDTWRRMK PKNLKKGRWT QDEHQNLFDL 120 VNLDLRLKAH QIKNPDHRML RDNISWEAIS DKLTTRNHKN CCLKWYETLA SPMVKEGIWS 180 DVDDYLLVEA LQKVDAVCIE DVDWDSLLDH RSGEVCRQRW NQMVRAIGGH REKPFIEQVE 240 VLSRRYCPEM IEYRSEEKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41020.1 | 3e-96 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG018990.10 |