PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG016430.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 300aa    MW: 33030.4 Da    PI: 7.0332
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG016430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.43.8e-145097148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd++lv     +G  +W+ +++  g+ R++k+c++rw +yl
  TRIDC7BG016430.1 50 KGPWTAEEDQKLVGFLLTHGHYCWRVVPKLAGLLRCGKSCRLRWTNYL 97
                      79******************99**********99************97 PP
2Myb_DNA-binding54.33.1e-17106147447
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        + eE++l +d+++qlG++ W++Ia+ ++ gRt++++k++w+++
  TRIDC7BG016430.1 106 LSDEEQQLVIDLHAQLGNR-WSKIAAQLP-GRTDNEIKNHWNTH 147
                       589****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
GRPSSNTPTH SRSEQRLPKF PGEKGRAIEP SLSQGQMGRQ PCCDKVGLKK GPWTAEEDQK  60
LVGFLLTHGH YCWRVVPKLA GLLRCGKSCR LRWTNYLRPD LKRGLLSDEE QQLVIDLHAQ  120
LGNRWSKIAA QLPGRTDNEI KNHWNTHIKK KLRKMGIDPV THRPLDQVPP RPAQQPPPPP  180
PTTTAWQQQD GAEHCQQVED EDVKAVPLIQ PHEVTAPPPT ASSNCSVSPA SVVSPSCSSS  240
AASGLEAAEW PEPMYLLGMD GIMDVGSGWD AGFVVPGGLS VDPFDHYYPD PAGFDQEAWL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.12e-82MYB family protein