PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG012000.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 156aa MW: 17810.3 Da PI: 8.4876 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 69.7 | 2.8e-22 | 1 | 41 | 11 | 51 |
HHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 11 vtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 vtfskRr g++KKAeEL vLCda+va+++fsstgkl ++s TRIDC7BG012000.4 1 VTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFAS 41 8************************************9986 PP | |||||||
2 | K-box | 49.1 | 2.4e-17 | 75 | 153 | 20 | 98 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ L++++ + +R++ Ge+L+ Ls+ eLqq+e++Le++l+++ +K++ +++qi++lq+k +l een++L++++ TRIDC7BG012000.4 75 KYDSLNEQLAEASLRLRRMRGEELDGLSVGELQQMEKNLETGLQRVLCTKDRQFMQQINDLQQKGTQLAEENMRLKNQV 153 5677777777777899***********************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
VTFSKRRRGL FKKAEELAVL CDADVALVVF SSTGKLSQFA SSSMNEIIDK YSTHSKNLGK 60 SNQQPAIDLN LEHCKYDSLN EQLAEASLRL RRMRGEELDG LSVGELQQME KNLETGLQRV 120 LCTKDRQFMQ QINDLQQKGT QLAEENMRLK NQVIRF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-44 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG012000.4 |