PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG009870.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 554aa MW: 61571.2 Da PI: 8.2276

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG009870.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.6	1e-22	127	228	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae++ ++++++ +l+ +d++ W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F + TRIDC7BG009870.7 127 FCKTLTASDTSTHGGFSVPRRAAEKIfppldftMQPPAQ--ELMAKDLHDIPWKFRHIFRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFI--R 215 99***************************96555544..8**********************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++ +l+++++r+ TRIDC7BG009870.7 216 DEKSQLLLGIRRA 228 5677789999997 PP
2	Auxin_resp	124.1	9.5e-41	253	335	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m feteds rr++Gt++g+ dldpvrW+nS+Wr+L+ TRIDC7BG009870.7 253 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQ 335 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
CTCTVSNHWA RVCEAGEKKA INSELWHACS GPLVAMPPVG SLVVYFPQGH SEQVAASMHK 60 EVDIIPNYPS LPSKLICKLL SLTLHADSET DEVYAQMTLQ PVNKYDRDAM LASELGLKQN 120 KQPVEFFCKT LTASDTSTHG GFSVPRRAAE KIFPPLDFTM QPPAQELMAK DLHDIPWKFR 180 HIFRGQPKRH LLTTGWSVFV STKRLLAGDS VLFIRDEKSQ LLLGIRRATR PQPALSSSVL 240 SSDSMHIGIL AAAAHAAANS SPFTIFYNPR ASPSEFVIPL AKYNKALYTQ VSLGMRFRML 300 FETEDSGVRR YMGTITGIGD LDPVRWKNSH WRNLQVGWDE STASERRTRV SIWEIEPVAT 360 PFYICPPPFF RPKLPKQPGM PDDESEVDSA FKRAMPWLGD DFALKDVQSQ LFPGLSLVQW 420 MAMQQNPQML PAGAPAVQAP YLNSSAMAMQ DGMGTGNDDL MRRFNMQGQN IGLSNSQVGS 480 KMDHPAMAQH QQQSHQLQQQ QQVQQSQQSS AVQQQQAQLL QQNAIHLQQQ SPKAAVTATA 540 AVEDRCKYAV NGAA

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

CTCTVSNHWA RVCEAGEKKA INSELWHACS GPLVAMPPVG SLVVYFPQGH SEQVAASMHK  60
EVDIIPNYPS LPSKLICKLL SLTLHADSET DEVYAQMTLQ PVNKYDRDAM LASELGLKQN  120
KQPVEFFCKT LTASDTSTHG GFSVPRRAAE KIFPPLDFTM QPPAQELMAK DLHDIPWKFR  180
HIFRGQPKRH LLTTGWSVFV STKRLLAGDS VLFIRDEKSQ LLLGIRRATR PQPALSSSVL  240
SSDSMHIGIL AAAAHAAANS SPFTIFYNPR ASPSEFVIPL AKYNKALYTQ VSLGMRFRML  300
FETEDSGVRR YMGTITGIGD LDPVRWKNSH WRNLQVGWDE STASERRTRV SIWEIEPVAT  360
PFYICPPPFF RPKLPKQPGM PDDESEVDSA FKRAMPWLGD DFALKDVQSQ LFPGLSLVQW  420
MAMQQNPQML PAGAPAVQAP YLNSSAMAMQ DGMGTGNDDL MRRFNMQGQN IGLSNSQVGS  480
KMDHPAMAQH QQQSHQLQQQ QQVQQSQQSS AVQQQQAQLL QQNAIHLQQQ SPKAAVTATA  540
AVEDRCKYAV NGAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG009870.7