PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG009870.16
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 956aa    MW: 106686 Da    PI: 6.619
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG009870.16genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.42.3e-2218119199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae++       ++++++  +l+ +d++   W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F   
  TRIDC7BG009870.16  18 FCKTLTASDTSTHGGFSVPRRAAEKIfppldftMQPPAQ--ELMAKDLHDIPWKFRHIFRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFI-- 105
                        99*****************************96555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC7BG009870.16 106 RDEKSQLLLGIRRA 119
                        45677789999997 PP
2Auxin_resp123.12e-40144226183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaa+++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m feteds  rr++Gt++g+ dldpvrW+nS+Wr+L+
  TRIDC7BG009870.16 144 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQ 226
                        79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 956 aa     Download sequence    
MLASELGLKQ NKQPVEFFCK TLTASDTSTH GGFSVPRRAA EKIFPPLDFT MQPPAQELMA  60
KDLHDIPWKF RHIFRGQPKR HLLTTGWSVF VSTKRLLAGD SVLFIRDEKS QLLLGIRRAT  120
RPQPALSSSV LSSDSMHIGI LAAAAHAAAN SSPFTIFYNP RASPSEFVIP LAKYNKALYT  180
QVSLGMRFRM LFETEDSGVR RYMGTITGIG DLDPVRWKNS HWRNLQVGWD ESTASERRTR  240
VSIWEIEPVA TPFYICPPPF FRPKLPKQPG MPDDESEVDS AFKRAMPWLG DDFALKDVQS  300
QLFPGLSLVQ WMAMQQNPQM LPAGAPAVQA PYLNSSAMAM QDGMGTGNDD LMRRFNMQGQ  360
NIGLSNSQVG SKMDHPAMAQ HQQQSHQLQQ QQQVQQSQQS SAVQQQQAQL LQQNAIHLQQ  420
QQEHLQRQQS LPQQQQEHLQ RQQSQPQQQL KTAASMPSME QHKLREQQPQ GGQAVSQAQM  480
LSQIFQPSSS QLQQLGLPKS PTQRPGFPGL PTACSLQQPA LGQAPQVQQA AEYQQALLQS  540
QQQQLQQLSQ PEMQLQLLQK IQQQNMLSQL NPQHQSQLMQ QLSQKNQEYL QQQILQHQLS  600
GSDAMVQFKQ SHQTPSNNIT GSLTPQQLAR SHSALAESED PSSSTAPSAN RLSPMNSLSR  660
THQGSRNLTD MTTSPHIDNL LQEIQSKPDN RNKNDTQSSK ETIPVPNRYP VSDQLDASSA  720
TSFCLDESPR EGFSFPPVCL DSNAQVDPRD NFLIAENVDS LMPDALLSRG MGSGKDICNL  780
PSGQRDHREV DNELSSAAFS SQSFGVPDMS FKPGCSGDIA VNDGGMPSQG LWNNQTQRMR  840
TFTKVQKRGS VGRSIDITRY TNYDELRHDL ACMFGIQGQL EDPYRMDWKL VYVDHENDIL  900
LVGDDPWEEF VSCVKSIKIL SSVEVQQMSL DGDLGGIPSQ TQACSASDDA NAWRGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein