PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG009870.13
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 1008aa    MW: 112614 Da    PI: 6.4792
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG009870.13genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.32.4e-2270171199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae++       ++++++  +l+ +d++   W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F   
  TRIDC7BG009870.13  70 FCKTLTASDTSTHGGFSVPRRAAEKIfppldftMQPPAQ--ELMAKDLHDIPWKFRHIFRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFI-- 157
                        99*****************************96555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC7BG009870.13 158 RDEKSQLLLGIRRA 171
                        45677789999997 PP
2Auxin_resp1232.2e-40196278183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaa+++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m feteds  rr++Gt++g+ dldpvrW+nS+Wr+L+
  TRIDC7BG009870.13 196 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQ 278
                        79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1008 aa     Download sequence    
MHKEVDIIPN YPSLPSKLIC KLLSLTLHAD SETDEVYAQM TLQPVNKYDR DAMLASELGL  60
KQNKQPVEFF CKTLTASDTS THGGFSVPRR AAEKIFPPLD FTMQPPAQEL MAKDLHDIPW  120
KFRHIFRGQP KRHLLTTGWS VFVSTKRLLA GDSVLFIRDE KSQLLLGIRR ATRPQPALSS  180
SVLSSDSMHI GILAAAAHAA ANSSPFTIFY NPRASPSEFV IPLAKYNKAL YTQVSLGMRF  240
RMLFETEDSG VRRYMGTITG IGDLDPVRWK NSHWRNLQVG WDESTASERR TRVSIWEIEP  300
VATPFYICPP PFFRPKLPKQ PGMPDDESEV DSAFKRAMPW LGDDFALKDV QSQLFPGLSL  360
VQWMAMQQNP QMLPAGAPAV QAPYLNSSAM AMQDGMGTGN DDLMRRFNMQ GQNIGLSNSQ  420
VGSKMDHPAM AQHQQQSHQL QQQQQVQQSQ QSSAVQQQQA QLLQQNAIHL QQQQEHLQRQ  480
QSLPQQQQEH LQRQQSQPQQ QLKTAASMPS MEQHKLREQQ PQGGQAVSQA QMLSQIFQPS  540
SSQLQQLGLP KSPTQRPGFP GLPTACSLQQ PALGQAPQVQ QAAEYQQALL QSQQQQLQQL  600
SQPEMQLQLL QKIQQQNMLS QLNPQHQSQL MQQLSQKNQE YLQQQILQHQ LSGSDAMVQF  660
KQSHQTPSNN ITGSLTPQQL ARSHSALAES EDPSSSTAPS ANRLSPMNSL SRTHQGSRNL  720
TDMTTSPHID NLLQEIQSKP DNRNKNDTQS SKETIPVPNR YPVSDQLDAS SATSFCLDES  780
PREGFSFPPV CLDSNAQVDP RDNFLIAENV DSLMPDALLS RGMGSGKDIC NLPSGQRDHR  840
EVDNELSSAA FSSQSFGVPD MSFKPGCSGD IAVNDGGMPS QGLWNNQTQR MRTFTKVQKR  900
GSVGRSIDIT RYTNYDELRH DLACMFGIQG QLEDPYRMDW KLVYVDHEND ILLVGDDPWE  960
EFVSCVKSIK ILSSVEVQQM SLDGDLGGIP SQTQACSASD DANAWRGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein