PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG009870.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 1043aa    MW: 116287 Da    PI: 6.5116
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG009870.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.32.6e-22105206199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae++       ++++++  +l+ +d++   W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F   
  TRIDC7BG009870.11 105 FCKTLTASDTSTHGGFSVPRRAAEKIfppldftMQPPAQ--ELMAKDLHDIPWKFRHIFRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFI-- 192
                        99*****************************96555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC7BG009870.11 193 RDEKSQLLLGIRRA 206
                        45677789999997 PP
2Auxin_resp122.92.3e-40231313183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaa+++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m feteds  rr++Gt++g+ dldpvrW+nS+Wr+L+
  TRIDC7BG009870.11 231 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQ 313
                        79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1043 aa     Download sequence    
PLVAMPPVGS LVVYFPQGHS EQFLKIPLLG QVAASMHKEV DIIPNYPSLP SKLICKLLSL  60
TLHADSETDE VYAQMTLQPV NKYDRDAMLA SELGLKQNKQ PVEFFCKTLT ASDTSTHGGF  120
SVPRRAAEKI FPPLDFTMQP PAQELMAKDL HDIPWKFRHI FRGQPKRHLL TTGWSVFVST  180
KRLLAGDSVL FIRDEKSQLL LGIRRATRPQ PALSSSVLSS DSMHIGILAA AAHAAANSSP  240
FTIFYNPRAS PSEFVIPLAK YNKALYTQVS LGMRFRMLFE TEDSGVRRYM GTITGIGDLD  300
PVRWKNSHWR NLQVGWDEST ASERRTRVSI WEIEPVATPF YICPPPFFRP KLPKQPGMPD  360
DESEVDSAFK RAMPWLGDDF ALKDVQSQLF PGLSLVQWMA MQQNPQMLPA GAPAVQAPYL  420
NSSAMAMQDG MGTGNDDLMR RFNMQGQNIG LSNSQVGSKM DHPAMAQHQQ QSHQLQQQQQ  480
VQQSQQSSAV QQQQAQLLQQ NAIHLQQQQE HLQRQQSLPQ QQQEHLQRQQ SQPQQQLKTA  540
ASMPSMEQHK LREQQPQGGQ AVSQAQMLSQ IFQPSSSQLQ QLGLPKSPTQ RPGFPGLPTA  600
CSLQQPALGQ APQVQQAAEY QQALLQSQQQ QLQQLSQPEM QLQLLQKIQQ QNMLSQLNPQ  660
HQSQLMQQLS QKNQEYLQQQ ILQHQLSGSD AMVQFKQSHQ TPSNNITGSL TPQQLARSHS  720
ALAESEDPSS STAPSANRLS PMNSLSRTHQ GSRNLTDMTT SPHIDNLLQE IQSKPDNRNK  780
NDTQSSKETI PVPNRYPVSD QLDASSATSF CLDESPREGF SFPPVCLDSN AQVDPRDNFL  840
IAENVDSLMP DALLSRGMGS GKDICNLPSG QRDHREVDNE LSSAAFSSQS FGVPDMSFKP  900
GCSGDIAVND GGMPSQGLWN NQTQRMRTFT KVQKRGSVGR SIDITRYTNY DELRHDLACM  960
FGIQGQLEDP YRMDWKLVYV DHENDILLVG DDPWEEFVSC VKSIKILSSV EVQQMSLDGD  1020
LGGIPSQTQA CSASDDANAW RGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein