PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG009870.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 1041aa    MW: 116046 Da    PI: 6.4803
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG009870.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.32.6e-22103204199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae++       ++++++  +l+ +d++   W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F   
  TRIDC7BG009870.10 103 FCKTLTASDTSTHGGFSVPRRAAEKIfppldftMQPPAQ--ELMAKDLHDIPWKFRHIFRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFI-- 190
                        99*****************************96555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC7BG009870.10 191 RDEKSQLLLGIRRA 204
                        45677789999997 PP
2Auxin_resp122.92.3e-40229311183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaa+++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m feteds  rr++Gt++g+ dldpvrW+nS+Wr+L+
  TRIDC7BG009870.10 229 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQ 311
                        79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1041 aa     Download sequence    
WHACSGPLVA MPPVGSLVVY FPQGHSEQQV AASMHKEVDI IPNYPSLPSK LICKLLSLTL  60
HADSETDEVY AQMTLQPVNK YDRDAMLASE LGLKQNKQPV EFFCKTLTAS DTSTHGGFSV  120
PRRAAEKIFP PLDFTMQPPA QELMAKDLHD IPWKFRHIFR GQPKRHLLTT GWSVFVSTKR  180
LLAGDSVLFI RDEKSQLLLG IRRATRPQPA LSSSVLSSDS MHIGILAAAA HAAANSSPFT  240
IFYNPRASPS EFVIPLAKYN KALYTQVSLG MRFRMLFETE DSGVRRYMGT ITGIGDLDPV  300
RWKNSHWRNL QVGWDESTAS ERRTRVSIWE IEPVATPFYI CPPPFFRPKL PKQPGMPDDE  360
SEVDSAFKRA MPWLGDDFAL KDVQSQLFPG LSLVQWMAMQ QNPQMLPAGA PAVQAPYLNS  420
SAMAMQDGMG TGNDDLMRRF NMQGQNIGLS NSQVGSKMDH PAMAQHQQQS HQLQQQQQVQ  480
QSQQSSAVQQ QQAQLLQQNA IHLQQQQEHL QRQQSLPQQQ QEHLQRQQSQ PQQQLKTAAS  540
MPSMEQHKLR EQQPQGGQAV SQAQMLSQIF QPSSSQLQQL GLPKSPTQRP GFPGLPTACS  600
LQQPALGQAP QVQQAAEYQQ ALLQSQQQQL QQLSQPEMQL QLLQKIQQQN MLSQLNPQHQ  660
SQLMQQLSQK NQEYLQQQIL QHQLSGSDAM VQFKQSHQTP SNNITGSLTP QQLARSHSAL  720
AESEDPSSST APSANRLSPM NSLSRTHQGS RNLTDMTTSP HIDNLLQEIQ SKPDNRNKND  780
TQSSKETIPV PNRYPVSDQL DASSATSFCL DESPREGFSF PPVCLDSNAQ VDPRDNFLIA  840
ENVDSLMPDA LLSRGMGSGK DICNLPSGQR DHREVDNELS SAAFSSQSFG VPDMSFKPGC  900
SGDIAVNDGG MPSQGLWNNQ TQRMRTFTKV QKRGSVGRSI DITRYTNYDE LRHDLACMFG  960
IQGQLEDPYR MDWKLVYVDH ENDILLVGDD PWEEFVSCVK SIKILSSVEV QQMSLDGDLG  1020
GIPSQTQACS ASDDANAWRG S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein