PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG009870.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 1065aa    MW: 118427 Da    PI: 6.4209
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG009870.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.22.6e-22127228199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae++       ++++++  +l+ +d++   W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F   +
  TRIDC7BG009870.1 127 FCKTLTASDTSTHGGFSVPRRAAEKIfppldftMQPPAQ--ELMAKDLHDIPWKFRHIFRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFI--R 215
                       99*****************************96555544..8************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC7BG009870.1 216 DEKSQLLLGIRRA 228
                       5677789999997 PP
2Auxin_resp122.92.3e-40253335183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaa+++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m feteds  rr++Gt++g+ dldpvrW+nS+Wr+L+
  TRIDC7BG009870.1 253 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQ 335
                       79*******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1065 aa     Download sequence    
MKDQGSAGVS PGPPEGEKKA INSELWHACS GPLVAMPPVG SLVVYFPQGH SEQVAASMHK  60
EVDIIPNYPS LPSKLICKLL SLTLHADSET DEVYAQMTLQ PVNKYDRDAM LASELGLKQN  120
KQPVEFFCKT LTASDTSTHG GFSVPRRAAE KIFPPLDFTM QPPAQELMAK DLHDIPWKFR  180
HIFRGQPKRH LLTTGWSVFV STKRLLAGDS VLFIRDEKSQ LLLGIRRATR PQPALSSSVL  240
SSDSMHIGIL AAAAHAAANS SPFTIFYNPR ASPSEFVIPL AKYNKALYTQ VSLGMRFRML  300
FETEDSGVRR YMGTITGIGD LDPVRWKNSH WRNLQVGWDE STASERRTRV SIWEIEPVAT  360
PFYICPPPFF RPKLPKQPGM PDDESEVDSA FKRAMPWLGD DFALKDVQSQ LFPGLSLVQW  420
MAMQQNPQML PAGAPAVQAP YLNSSAMAMQ DGMGTGNDDL MRRFNMQGQN IGLSNSQVGS  480
KMDHPAMAQH QQQSHQLQQQ QQVQQSQQSS AVQQQQAQLL QQNAIHLQQQ QEHLQRQQSL  540
PQQQQEHLQR QQSQPQQQLK TAASMPSMEQ HKLREQQPQG GQAVSQAQML SQIFQPSSSQ  600
LQQLGLPKSP TQRPGFPGLP TACSLQQPAL GQAPQVQQAA EYQQALLQSQ QQQLQQLSQP  660
EMQLQLLQKI QQQNMLSQLN PQHQSQLMQQ LSQKNQEYLQ QQILQHQLSG SDAMVQFKQS  720
HQTPSNNITG SLTPQQLARS HSALAESEDP SSSTAPSANR LSPMNSLSRT HQGSRNLTDM  780
TTSPHIDNLL QEIQSKPDNR NKNDTQSSKE TIPVPNRYPV SDQLDASSAT SFCLDESPRE  840
GFSFPPVCLD SNAQVDPRDN FLIAENVDSL MPDALLSRGM GSGKDICNLP SGQRDHREVD  900
NELSSAAFSS QSFGVPDMSF KPGCSGDIAV NDGGMPSQGL WNNQTQRMRT FTKVQKRGSV  960
GRSIDITRYT NYDELRHDLA CMFGIQGQLE DPYRMDWKLV YVDHENDILL VGDDPWEEFV  1020
SCVKSIKILS SVEVQQMSLD GDLGGIPSQT QACSASDDAN AWRGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein